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Name : gabD (BN118_0985) Accession : YP_006625680.1 Strain : Bordetella pertussis 18323 Genome accession: NC_018518 Putative virulence/resistance : Unknown Product : succinate-semialdehyde dehydrogenase Function : - COG functional category : - COG ID : - EC number : 1.2.1.16 Position : 1071761 - 1073230 bp Length : 1470 bp Strand : - Note : - DNA sequence : ATGACGCAGTTGACCCAACCCCTGAGCCGCGCCGAACTGCTGCGCGACGCCTGCTACATCGACGGCAAGTGGGTAGGCGC CGGCAACGGCCCGTCCATCCCGGTCGATAACCCGTCCACCGGCAAGACCATCATCTCGGTGCCCAAGCTGGGCCGCAAGG AAGCCGAGCAGGCCATCGACGCCGCCGAGGCCGCCCTGCCCGCCTGGAGCGCCAGGACCGGCAAGGAGCGCGCCGCGATC CTGCTGAAGTGGGCCCAGCTGATGATGGAGAACCAGCAGGACCTGGCCGTCATCATGACGTCCGAGCAAGGCAAGCCCGT GCCCGAGGCCGCCGGCGAGATCGCCTACGCCGCGTCCTTCCTGGAGTGGTTCGCCGAAGAAGCCAAGCGCATCGACGGCG ACATCCTGCAAAGCCCCAAGGGCGGCCAGCGCCTGATGGTGCTCAAGCAGCCCATCGGCGTGACCGCCGCCATCACGCCG TGGAACTTCCCGGCCGCCATGATCACCCGCAAGGTCGGCCCGGCCCTGGCCGCCGGCTGCACCATGGTGGTCAAGCCGGC CCAGCAGACGCCGCTGACCGCGCTCGCGCTGGCCGTGCTGGCCGTGCTGGCCGGCGTGCCGGCCGGCGTGTTCCAGGTCG TGACCGGCAGCTCGCGTGAAATCGGCGCGGCCCTGTGCGAAAGCGAAGTGGTGCGCAAGCTGAGCTTCACCGGCTCGACC GAAGTCGGCCGCACGCTCATGGAGCAATGCGCGCCCACCATCAAGAAACTGTCGCTGGAACTGGGCGGCAACGCGCCGTT CATCGTGTTCGACGACGCCGACCTGGATCGCGCCATCGACGGCATTCTGGCCTCCAAGTACCGCAACGCCGGCCAGACCT GCGTATGCGCCAACCGCATCTACGTGCAGGCCGGCGTCTACGAGGAAGTGGCCAAGCGCCTGGTCGAGAAGGTCAACGCC ATGAAGGTGGGCGACGGCTTCGAACAGGGCGTCACCCAGGGCCCGCTGATCGACACCGCCGCCGTGGCCAAGGTGCAGGA ACACATCGCCGACGCCACCGCGCACGGCGCCAAGGTCATCGCCGGCGGCGAGCCGCATGCGCTGGGCGGCAGCTTCTTCC AGCCCACGGTGGTGCGCGACGTCACGCAGTCGATGCGCTTTGCCGTCGAGGAAACCTTCGGCCCGGTCGCCCCGCTGTTC AAGTTCGACAGCGAAGACGAAGTCATCGGCATGGCCAACAACACCATCTTCGGCCTGGCCGCCTACTTCTACACGCGCGA CTACGCCCGGATCTGGCGCGTCTCCGAAGCGCTGGAATACGGCATCGTCGGCATCAACACCGGCATCATCTCCAATGAAG TCGGCCCGTTCGGCGGCGTCAAGCAATCCGGCCTGGGCCGCGAAGGCTCGAAGTACGGGATCGAGGACTACCTCGAGCTG AAATACCTCTGCGTGGACCTGGGCGCCTGA Protein sequence : MTQLTQPLSRAELLRDACYIDGKWVGAGNGPSIPVDNPSTGKTIISVPKLGRKEAEQAIDAAEAALPAWSARTGKERAAI LLKWAQLMMENQQDLAVIMTSEQGKPVPEAAGEIAYAASFLEWFAEEAKRIDGDILQSPKGGQRLMVLKQPIGVTAAITP WNFPAAMITRKVGPALAAGCTMVVKPAQQTPLTALALAVLAVLAGVPAGVFQVVTGSSREIGAALCESEVVRKLSFTGST EVGRTLMEQCAPTIKKLSLELGGNAPFIVFDDADLDRAIDGILASKYRNAGQTCVCANRIYVQAGVYEEVAKRLVEKVNA MKVGDGFEQGVTQGPLIDTAAVAKVQEHIADATAHGAKVIAGGEPHALGGSFFQPTVVRDVTQSMRFAVEETFGPVAPLF KFDSEDEVIGMANNTIFGLAAYFYTRDYARIWRVSEALEYGIVGINTGIISNEVGPFGGVKQSGLGREGSKYGIEDYLEL KYLCVDLGA |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| orf17 | AAO17183.1 | Orf17 | Not tested | tcd island | Protein | 6e-137 | 64 |
| cur_1509 | YP_001800903.1 | NAD-dependent aldehyde dehydrogenase | Not tested | Not named | Protein | 3e-72 | 41 |
