Gene Information

Name : Desmer_0008 (Desmer_0008)
Accession : YP_006619989.1
Strain : Desulfosporosinus meridiei DSM 13257
Genome accession: NC_018515
Putative virulence/resistance : Unknown
Product : pyridoxal phosphate synthase yaaD subunit
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 9552 - 10436 bp
Length : 885 bp
Strand : +
Note : PFAM: SOR/SNZ family; TIGRFAM: pyridoxal 5'-phosphate synthase, synthase subunit Pdx1

DNA sequence :
ATGACTGACATCGGTTCGTTTAAAGTGAAAACAGGACTTGCGGAAATGCTTAAAGGGGGAGTTATTATGGATGTAACAAC
CCCAGAACAGGCTATTATTGCAGAAGAGGCTGGAGCATGTGCTGTCATGGCTCTAGAGCGCGTTCCTTCAGATATTCGTG
CAGAAGGCGGAGTTGCACGAATGGCAGATCCATCAATAATTCAGAGCATTATGGCTGTAGTGTCTATTCCAGTCATGGCT
AAGGCAAGAATTGGTCATTTTGTTGAAGCTCGGATTTTAGAAGCCTTAGGCGCTGATTATATTGATGAGTCTGAAGTGCT
AACACCTGCAGATGATTCTTATCATATTAATAAGCATGATTTTAAAGTTCCTTTTGTTTGTGGATGTCGGAATCTAGGGG
AAGCATTACGCCGTATTGGCGAAGGTGCCGCCATGATTCGTACGAAGGGTGAGCCTGGAACAGGTAACGTTATTGAGGCA
GTTCGACATATGCGAACTGTTATGAGTGAAATACGTGCCTTAACCTTAACTCCCAAAGAGGAGCTTATGTCTGCAGCTAA
AAATATGGGTGCACCCTATGATTTAGTTCTTTATGTTGCAGAACACGGCAAGCTACCTGTCGTTAATTTTGCTGCAGGAG
GAATAGCAACACCGGCAGATGCAGCATTGATGATGCATTTAGGAGTAGATGGTATTTTTGTAGGATCTGGTATTTTTAAA
TCCGGTGACCCAAAAGCACGAGCCAAAGCTATTGTAATGGCAACAACACATTACAAAGATGCAAAATTGCTTGCAGAGAT
TTCTAAGGATTTAGGACAACCTATGTCTGGAATTGAAATATCAACCTTGACTGAATCTCAGAGAATGCAAGAACGGGGTT
GGTAA

Protein sequence :
MTDIGSFKVKTGLAEMLKGGVIMDVTTPEQAIIAEEAGACAVMALERVPSDIRAEGGVARMADPSIIQSIMAVVSIPVMA
KARIGHFVEARILEALGADYIDESEVLTPADDSYHINKHDFKVPFVCGCRNLGEALRRIGEGAAMIRTKGEPGTGNVIEA
VRHMRTVMSEIRALTLTPKEELMSAAKNMGAPYDLVLYVAEHGKLPVVNFAAGGIATPADAALMMHLGVDGIFVGSGIFK
SGDPKARAKAIVMATTHYKDAKLLAEISKDLGQPMSGIEISTLTESQRMQERGW

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
DIP0227 NP_938620.1 pyridoxal biosynthesis lyase PdxS Not tested Not named Protein 7e-86 67
pdxS YP_005137204.1 pyridoxine biosynthesis protein Not tested Not named Protein 1e-85 67
pdxS YP_005141805.1 pyridoxine biosynthesis protein Not tested Not named Protein 1e-85 67