Gene Information

Name : Desmer_0624 (Desmer_0624)
Accession : YP_006620528.1
Strain : Desulfosporosinus meridiei DSM 13257
Genome accession: NC_018515
Putative virulence/resistance : Resistance
Product : amino acid ABC transporter ATP-binding protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 643165 - 643890 bp
Length : 726 bp
Strand : +
Note : PFAM: ABC transporter

DNA sequence :
TTGATTCAATTAGAAGGGGTAAACAAACATTTTGGTCATTTGCACGTCTTGAAAAATATCGATTTAACAGTTAAAACGGG
AGAAAAATTGGTGGTCATTGGCCCCAGCGGATCAGGCAAGAGTACACTAATTCGATGTATGAACCTTTTAGAGAAGCCGA
GTTCTGGTAAGGTTACAGTGGATGGTGTTGAAATTACTGCTCACAAGGCATTAGTGGCTAAGGTTCGTCAATCAGTTGCG
ATGGTCTTTCAACAATTTAATCTCTATCCGCACAAAACGGTATTAGAAAATTTAACTCTTGCCCCAATACTTATCAAAAA
AGTGTCCCCGGCTGAGGCCGCCGAGGCTGGTTTAGCCTATCTTGAACGCGTAGGGCTGAAAGAAAAGGCTAATGTCTATC
CCTCTCAACTTTCTGGGGGACAGCAGCAACGTGTGGCGATTGCCAGAGCTTTGGCAATGCGTCCAAAAATCATGCTCTTT
GATGAGCCAACATCAGCCTTAGATCCTGAGATGATTCAGGAAGTTCTCGACGTTATGGTTGATTTAGCCCACGAGGGAAT
TACGATGGTCGTAGTTACCCATGAAATGGGTTTTGCTAAAACCGTCGCAGATCGCGTTATTTTCATGGATGACGGACAGA
TTGTAGAAGAAAATACTCCTAAATGCTTTTTTGAAAACCCTACCCACGAACGAACTAAATCGTTCCTAAGCCGAATTTTG
CGCTAG

Protein sequence :
MIQLEGVNKHFGHLHVLKNIDLTVKTGEKLVVIGPSGSGKSTLIRCMNLLEKPSSGKVTVDGVEITAHKALVAKVRQSVA
MVFQQFNLYPHKTVLENLTLAPILIKKVSPAEAAEAGLAYLERVGLKEKANVYPSQLSGGQQQRVAIARALAMRPKIMLF
DEPTSALDPEMIQEVLDVMVDLAHEGITMVVVTHEMGFAKTVADRVIFMDDGQIVEENTPKCFFENPTHERTKSFLSRIL
R

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
Cp1002_1464 YP_005681730.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 1e-25 41
CpC231_1466 YP_005683828.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 5e-27 41
cpfrc_01473 YP_003783873.1 hypothetical protein Not tested PiCp 5 Protein 5e-27 41
CpI19_1473 YP_005685914.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 5e-27 41

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Desmer_0624 YP_006620528.1 amino acid ABC transporter ATP-binding protein NC_012469.1.7686878. Protein 5e-30 45