Gene Information

Name : Desmer_0529 (Desmer_0529)
Accession : YP_006620442.1
Strain : Desulfosporosinus meridiei DSM 13257
Genome accession: NC_018515
Putative virulence/resistance : Virulence
Product : Mn/Zn ABC transporter ATPase
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 545504 - 546265 bp
Length : 762 bp
Strand : -
Note : PFAM: ABC transporter

DNA sequence : 
ATGGAGAACAAAACAACCCTGGACTATGTGGTTGAAGTAGAAGATTTGACCGTTGCCTACGACGCCAAACCCGTTTTGTG
GGATGTTGACTTAAAAATCCCCAGGGGCCGGCTGATGGCCATCGTTGGTCCTAACGGAGCAGGGAAAACCACTTTACTTA
AAGCTATGCTTAACCTGCTTACTTCAGTATCCGGCGTCATCCGTTTCCTGCCGGGGGAAACGGGTGACTCACCCAAAAAT
AAAATCAGAATCGGTTATGTTCCGCAAAGCGGCAGTGTCGACTGGGATTTTCCCGCTACTGTGCTGGATGTAGTTCTTAT
GGGCCGTTATGGTCTGCTGGGCTGGGTGAAACGTCCCGGCAAAAACGATGTGGCCATCGCTAAACAAACCCTGGAGAAAG
TCGGCATGGAAAAGTTCTCCTCCCGCCAGATCAGCCAGCTCTCCGGCGGCCAGCAGCAACGGGTTTTTCTGGCCCGAGCC
CTTGTCCAGGAAGCGGAAATCTATTTCATGGATGAACCCTTTAAAGGGGTGGATGCCCAAACGGAAAAGGCCATTGTTCA
GCTGCTTAAAGAATTGAAAGCTCAAGGTAAAACCGTCGTCGTAGTTCATCATGACCTGCAGACCGTAGCTGATTATTTTG
ACTGGGTTACCCTGATCAATCTGCGGGTAGTTGCCTGCGGACCGGTTAAGGAAGTCTTCCACGAAGAAAATTTAAAGACC
GTGTACCGCAGCAGCGGGGCATTGTTGAAAAGCAGGGTGTAG

Protein sequence : 
MENKTTLDYVVEVEDLTVAYDAKPVLWDVDLKIPRGRLMAIVGPNGAGKTTLLKAMLNLLTSVSGVIRFLPGETGDSPKN
KIRIGYVPQSGSVDWDFPATVLDVVLMGRYGLLGWVKRPGKNDVAIAKQTLEKVGMEKFSSRQISQLSGGQQQRVFLARA
LVQEAEIYFMDEPFKGVDAQTEKAIVQLLKELKAQGKTVVVVHHDLQTVADYFDWVTLINLRVVACGPVKEVFHEENLKT
VYRSSGALLKSRV

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
EF0575 NP_814340.1 cationic ABC transporter ATP-binding protein Not tested Not named Protein 2e-45 47
ef0093 AAM75296.1 EF0093 Not tested Not named Protein 1e-45 47
sitB YP_217782.1 iron transporter: fur regulated Virulence SPI-1 Protein 2e-49 42
sitB NP_457256.1 Iron transport protein, ATP-binding component Virulence SPI-1 Protein 1e-49 42
sitB NP_806465.1 iron ABC transporter ATP-binding protein Virulence SPI-1 Protein 1e-49 42
sitB NP_461783.1 ATP-binding protein Virulence SPI-1 Protein 1e-49 42
sitB AAD41066.1 SitB Virulence centisome 63 pathogenicity island Protein 9e-50 42

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Desmer_0529 YP_006620442.1 Mn/Zn ABC transporter ATPase BAC0400 Protein 1e-70 60
Desmer_0529 YP_006620442.1 Mn/Zn ABC transporter ATPase BAC0350 Protein 6e-50 42
Desmer_0529 YP_006620442.1 Mn/Zn ABC transporter ATPase BAC0440 Protein 9e-46 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Desmer_0529 YP_006620442.1 Mn/Zn ABC transporter ATPase VFG0526 Protein 5e-50 42