Gene Information

Name : Desmer_4637 (Desmer_4637)
Accession : YP_006624304.1
Strain : Desulfosporosinus meridiei DSM 13257
Genome accession: NC_018515
Putative virulence/resistance : Unknown
Product : single-stranded DNA-binding protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 4844955 - 4845365 bp
Length : 411 bp
Strand : -
Note : PFAM: Single-strand binding protein family; TIGRFAM: single stranded DNA-binding protein (ssb)

DNA sequence :
ATGTTAAATCGTGTCATCTTGATAGGCCGTTTGACGAAAGACCCCGAATTGCGATACACCCCAACAGGTGTAGCGGTTGC
AAATTTTACATTAGCAATTGATCGCAATTATAAGAATTCTCAAGGGGAAAGAGATACCGACTTTATTAATTGCGTAGTTT
ATCGGCAACTTGCTGAACTCTGTGCTAATTATTTAGCTAAGGGTAAACTGGCATCAGTTGATGGTCGAATTCAGGTGCGT
TCGTACACTGGACAAGATGGTCAAAAGCGCTGGGTAACAGAGGTTATTGCTGAAGATGTTCGTTTCCTAAGTCCAAAAGA
TAGTGGAGGCGGAAGCGCAGAATCGAGATCCTTTGGTGGGAATAGTTCCTTTGGACATGAAGTGAATTTGGATGATGACA
TCCCATTCTAA

Protein sequence :
MLNRVILIGRLTKDPELRYTPTGVAVANFTLAIDRNYKNSQGERDTDFINCVVYRQLAELCANYLAKGKLASVDGRIQVR
SYTGQDGQKRWVTEVIAEDVRFLSPKDSGGGSAESRSFGGNSSFGHEVNLDDDIPF

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
SAOV_0290 YP_005735807.1 Single-stranded DNA-binding protein, phage associated Not tested ¥ÕSa1 Protein 3e-31 62
SAV0864 NP_371388.1 ssDNA-binding protein Not tested ¥ÕSa1 Protein 3e-31 62
SAOV_1081 YP_005736576.1 ssDNA-binding protein Not tested ¥ÕSa2 Protein 5e-31 62
SAOV_1956c YP_005737400.1 Single-stranded DNA-binding protein, phage associated Not tested ¥ÕSa3 Protein 2e-30 61
SA1792 NP_375091.1 single-strand DNA-binding protein Not tested ¥ÕSa3 Protein 3e-31 58
SAUSA300_1958 YP_494609.1 single-strand binding protein Not tested ¥ÕSa3 Protein 4e-31 58
SAUSA300_1958 YP_494609.1 single-strand binding protein Not tested ¥ÕSa3 Protein 4e-31 58
SAV1983 NP_372507.1 single-strand DNA-binding protein Not tested ¥ÕSa3 Protein 3e-31 58
SAKOR_01963 YP_008492151.1 Single-strand DNA binding protein Not tested ¥ÕSa3 Protein 7e-31 57
MW1921 NP_646738.1 single-strand DNA-binding protein Not tested ¥ÕSa3 Protein 1e-30 55
SH1792 YP_253707.1 single strand DNA binding protein Not tested ¥ÕSh1 Protein 2e-31 53
ef0020 AAM75226.1 EF0020 Not tested Not named Protein 7e-27 49
ssb-2 NP_814280.1 single-strand binding protein Not tested Not named Protein 1e-26 49
SEQ_0802 YP_002746140.1 single-strand binding protein Not tested ¥ÕSeq2 Protein 2e-25 48
ef0030 AAM75236.1 EF0030 Not tested Not named Protein 1e-16 44
ssb-3 NP_814291.1 single-strand binding protein Not tested Not named Protein 2e-16 44
EFAU085_00699 YP_008394223.1 single-strand binding protein Not tested Not named Protein 3e-20 43