Gene Information

Name : Desmer_0443 (Desmer_0443)
Accession : YP_006620363.1
Strain : Desulfosporosinus meridiei DSM 13257
Genome accession: NC_018515
Putative virulence/resistance : Virulence
Product : response regulator with CheY-like receiver domain and winged-helix DNA-binding domain
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 456586 - 457269 bp
Length : 684 bp
Strand : +
Note : PFAM: Response regulator receiver domain; Transcriptional regulatory protein, C terminal

DNA sequence :
ATGGAAAACAAAGGTCAGCGGATTCTGATTATTGATGATGAAACCCAAATCAGGAAATTTTTAAGAGTGGCCTTAACCAG
TCATGGATATGTGGTCAAAGATGCTAAGACGGGTAAAGAGGGTCTTGAGGAAGTTGCTATTTTCAGTCCGGATTTAGTAG
TTCTGGATTTAGGGTTGCCTGATCTTGACGGGATAGAGGTAGTGCGTATACTGCGAGAATGGACAAAAGTACCTATTATC
ATTTTATCGGTCAATGAACAAGAGAATGATAAGATTACCGCTCTGGATGTTGGGGCAGATGATTATGTGACGAAACCCTT
TGGCATGGGTGAATTACTGGCTCGAATTCGAGCGGCAATGCGTCACAGCAAAGGAGTAGAGGAACAGCCGGTTTTGCATT
TTGCTGACTTGTCCATCGATTTTTTGCATCGCCGGGTTACCAGAGATGATCAAGAGATCAAGCTTACCTTGACAGAATAT
GAAATTGTTAAGAATTTGGCGATTAATGCTGGAAAGGTATTAACCCACAGCTATCTACTGCGCACGGTATGGGGACCCTC
CTATGAGAAGGAAGTACAGTATTTACGGGTTTATATTGGCCAGATTAGGAGAAAGTTGGAACTTGATCCATCCCGTCCAC
AGCATATTATCACTGAATCAGGGGTAGGATATCGTTTGTTGTAA

Protein sequence :
MENKGQRILIIDDETQIRKFLRVALTSHGYVVKDAKTGKEGLEEVAIFSPDLVVLDLGLPDLDGIEVVRILREWTKVPII
ILSVNEQENDKITALDVGADDYVTKPFGMGELLARIRAAMRHSKGVEEQPVLHFADLSIDFLHRRVTRDDQEIKLTLTEY
EIVKNLAINAGKVLTHSYLLRTVWGPSYEKEVQYLRVYIGQIRRKLELDPSRPQHIITESGVGYRLL

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
ef0091 AAM75294.1 EF0091 Not tested Not named Protein 9e-36 48
EF0571 NP_814337.1 DNA-binding response regulator Not tested Not named Protein 1e-35 48

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Desmer_0443 YP_006620363.1 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain VFG1390 Protein 5e-30 42