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Name : Desmer_4340 (Desmer_4340) Accession : YP_006624023.1 Strain : Desulfosporosinus meridiei DSM 13257 Genome accession: NC_018515 Putative virulence/resistance : Virulence Product : nucleoside-diphosphate sugar epimerase Function : - COG functional category : - COG ID : - EC number : - Position : 4545792 - 4547666 bp Length : 1875 bp Strand : - Note : PFAM: Polysaccharide biosynthesis protein DNA sequence : GTGTTATTCCGCAAACGGACGTTGATTTTAATGCTGATTGATGCTTTGTTAATCAACTTGGCAGCTTTCGGCAGTTTTTA TTTGCGCTTTGATGAAGGCATACCTCTGGACTATTATCAGACCTATTATCACACAGCCATCGGGGGAACTATTTTATATC TGGCTGTTTTCTATGTCTTTGGGCTATATAACCGTCTCTGGCAGTATGCAAGTACCGGGGAATTACTCTCGATTGTTTAT GCAGTATCCGTTGGAACCGGCGGAACCGTCGCGGCAGTTTATTTCTATGGTTTATCAAATGCGGACACCCTTTCCTATAT TAGGATGCCCCATACTGCGGCAGTGCTTCTTTGGCTGGCCATGGTCTTTTTAATTGGAGGATCTAGGTTCATCTGGCGGA TCTTGCAGGAAAACGCCTTTGACCGCCATGTTCCGGGCTCCCAAAAGCAGGTGCTCATTGTTGGAGCGGGGGATGCAGGG GTATTAGCGGCCCGGGAATTGAAAAATCGGAACTATCGGGATGGACGTCCGATTGGGTTTATCGACGATAACCACTCTAA ACAAAAGCTCCAGCTGTTAGGAATTCCTGTTTTGGGTACCCGTCTGGATATTGCCCGGGTTGTAAAAGGACATAATGTGG ATGAAGTTATTATTGCCATGCCTTCAGCATCAGGGGAAGCAGTTCGCGAGATTGTCCAAATCTGCGAAAAATTAGGGGTT ATTCTGAAGATTATGCCCGGCGTCTATGACATTATTAGCGGTGACATGAATGTTAAACCGATTCGCCAGGTTCAAGTTGA GGATTTACTCGGTCGAGACCCGGTTTCGGTCGATTTAGAGGAAGTAGCAGGCTACGTTGCAGGAGAGACGGTGATTATTA CCGGAGCAGGGGGTTCAATCGGTTCGGAAATCTGCCGTCAAATCGCCAGGTTTAATCCCGGGAGGCTGGTCTTACTGGGG CATGGGGAAAACACCATTTTTGACATCGAACAAGAACTGCGTTCTGAGCACCCGGGAATTGACTATATTACAGAGATCTT GGATATTAAAGATCGGGAAAAAGTCTTCTTAATCTTTGAACGCTATAAGCCCGGGGTTGTCTTCCACGCGGCGGCTCATA AACATGTTCCATTGATGGAAAGAAATCCGGAAGAAGCTCTTAAAAATAACGTTGTCGGCACCCAAAATTTAGCGGAAGCT GCTGATGAAGTAAAAGTGAAGACCTTTGTTTCAATTTCTACGGATAAGGCGGTTAATCCAACAAGCGTTATGGGGGCCAC AAAACGTACGTCAGAAATGATTATTCAAAGCTTAGACCTTCGTTCTCAGACAAAGTTTGTTGCAGTTAGGTTTGGGAATG TATTGGGGAGTCGTGGCAGCGTAATTCCAACCTTTAAACGGCAAATTGCCCAAGGCGGTCCTGTTACAGTCACACATCCT GATATGGTGCGTTACTTTATGACAATCCCTGAGGCAGCTCAGTTAGTTATCCAAGCCGGAGCTATGGCTCGCGGCGGAGA GATCTTTATCTTGGATATGGGGAAACCTGTTAAGATTGTAGACTTGGCTAAAGACTTAATTCGGCTTTCTGGGTTTGAAC CGGATGTTGATATTAAGATACAATTCACAGGAATTCGGCCGGGGGAAAAGCTCTTTGAAGAGTTGTTGACGGCTGAAGAG GGAGTCACTTCTACTAAACATAGTAGAATCTTCGTTGCCAAGCCCAATAATATTGATGTTAAGCTCCTGGAAGAGTTAAC CCATATTATTCGAGAACGGGGTAGCTTTTTAACCAGAGATGAAGTTATCAAGTTGTTGCAGACAGTTATTCCGGCCTTTC GTAAGAAAACAGAAAAAGTAGTCGTTAATCAGTAA Protein sequence : MLFRKRTLILMLIDALLINLAAFGSFYLRFDEGIPLDYYQTYYHTAIGGTILYLAVFYVFGLYNRLWQYASTGELLSIVY AVSVGTGGTVAAVYFYGLSNADTLSYIRMPHTAAVLLWLAMVFLIGGSRFIWRILQENAFDRHVPGSQKQVLIVGAGDAG VLAARELKNRNYRDGRPIGFIDDNHSKQKLQLLGIPVLGTRLDIARVVKGHNVDEVIIAMPSASGEAVREIVQICEKLGV ILKIMPGVYDIISGDMNVKPIRQVQVEDLLGRDPVSVDLEEVAGYVAGETVIITGAGGSIGSEICRQIARFNPGRLVLLG HGENTIFDIEQELRSEHPGIDYITEILDIKDREKVFLIFERYKPGVVFHAAAHKHVPLMERNPEEALKNNVVGTQNLAEA ADEVKVKTFVSISTDKAVNPTSVMGATKRTSEMIIQSLDLRSQTKFVAVRFGNVLGSRGSVIPTFKRQIAQGGPVTVTHP DMVRYFMTIPEAAQLVIQAGAMARGGEIFILDMGKPVKIVDLAKDLIRLSGFEPDVDIKIQFTGIRPGEKLFEELLTAEE GVTSTKHSRIFVAKPNNIDVKLLEELTHIIRERGSFLTRDEVIKLLQTVIPAFRKKTEKVVVNQ |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| SSP0063 | YP_300153.1 | capsular polysaccharide biosynthesis protein | Not tested | SCC15305cap | Protein | 4e-115 | 48 |
| cap1D | AAA64643.1 | type 1 capsule synthesis gene | Virulence | SCCcap1 | Protein | 7e-112 | 47 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| Desmer_4340 | YP_006624023.1 | nucleoside-diphosphate sugar epimerase | VFG1300 | Protein | 4e-117 | 46 |
| Desmer_4340 | YP_006624023.1 | nucleoside-diphosphate sugar epimerase | VFG0029 | Protein | 8e-83 | 44 |
