Gene Information

Name : Desmer_4236 (Desmer_4236)
Accession : YP_006623928.1
Strain : Desulfosporosinus meridiei DSM 13257
Genome accession: NC_018515
Putative virulence/resistance : Unknown
Product : RNAse PH
Function : -
COG functional category : -
COG ID : -
EC number : 2.7.7.56
Position : 4421955 - 4422680 bp
Length : 726 bp
Strand : -
Note : PFAM: 3' exoribonuclease family, domain 1; 3' exoribonuclease family, domain 2; TIGRFAM: ribonuclease PH

DNA sequence :
ATGCAACGTTCTTATAGTCGAGGAAATGATCATTTACGTCCGGTGAAAATCACTCGAAAGTTTACAAACATCCCCGAAGG
TTCGGTTCTTATAGAGATCGGAGAAACCAGGGTTTTGTGCACTGCCAGCGTCGAAGAAAAAGTACCGCATTTTCAGAAGG
GATCAGGGAAAGGCTGGGTTACAGCAGAATATTCCATGATTCCTCGCGCAACCCAAACTCGGACTCAGCGTGAGGCCAGT
AAAGGCAAGCTCACCGGCCGAACTATGGAGATCCAACGTTTAATCGGTCGTGCTTTGCGATCGGTTATTGACTTGAAGAA
ACTTGGCGAACGTACAATTTGGCTTGATTGTGACGTCCTCCAAGCGGACGGCGGAACCCGAACAGCGGCAATTACCGGAG
CTTATGTGGCCTTAGTCGATGCAGTTCAATATTTGCTGGATAAGAAACTTCTTAAAACAAATCCGATAGAGGATAGCTTA
GCTGCAGTTTCCGTGGGTAAGGTTCAGGGAAATGCAGTTTTAGACTTAGACTATGAAGAAGATTCTCAGGCGGAAGTGGA
TATGAATATTGTCATGACAGGTGCAGGAAAGTTCGTGGAGATCCAAGGAACGGCAGAAGATATTCCCTTTGATCGCGAGG
ATCTGAATAATTTTTTAGAACTTGCTGAAAAGGGGATACGTTCCCTAATGGATGCTCAGAAAGCTGCGGCGGAGACATCT
GTATGA

Protein sequence :
MQRSYSRGNDHLRPVKITRKFTNIPEGSVLIEIGETRVLCTASVEEKVPHFQKGSGKGWVTAEYSMIPRATQTRTQREAS
KGKLTGRTMEIQRLIGRALRSVIDLKKLGERTIWLDCDVLQADGGTRTAAITGAYVALVDAVQYLLDKKLLKTNPIEDSL
AAVSVGKVQGNAVLDLDYEEDSQAEVDMNIVMTGAGKFVEIQGTAEDIPFDREDLNNFLELAEKGIRSLMDAQKAAAETS
V

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
rph YP_001800860.1 ribonuclease PH Not tested Not named Protein 2e-67 61