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Name : Desmer_4127 (Desmer_4127) Accession : YP_006623827.1 Strain : Desulfosporosinus meridiei DSM 13257 Genome accession: NC_018515 Putative virulence/resistance : Virulence Product : capsular exopolysaccharide biosynthesis protein Function : - COG functional category : - COG ID : - EC number : - Position : 4301088 - 4301798 bp Length : 711 bp Strand : - Note : PFAM: CobQ/CobB/MinD/ParA nucleotide binding domain; TIGRFAM: capsular exopolysaccharide family DNA sequence : TTGGTCTATTCGTTAATCACCTTTGAGCAAACAAAATCTCCAATCTCGGAGGCCTATCGGGCGCTTAGAACAAATGTTCA GTTTACGAGTGTGGATTCAAACACTCAAATAATAGCGGTAACAAGCTCAGGTCCCGGGGAGGGAAAATCTCATACCGTCG CTAATCTTGCGGTAAGTATCGCTCAATCCGGAAAATCTGTGCTGATTATTGACGCTGATTTACGTAATCCCACTCAACAT AAACTATTTGGGGTAGATAATAGAGTGGGGTTATCGGTTTACCTGGTTGAGGATCAGGACTATCGAAAACCTGTCTGGGA TACAGCTGTGCCAAGTGTTCGGCTTCTTCCAGCTGGTCCCATTCCTCCAAATCCTGCCGAGCTTGTGGGGTCCAACCGGA TGAAAGGTTTAATCGAGGAAGTCAGTGGGGAATTTGACATGGTTCTCATCGATACTCCTCCCGTTATTGCCGTTACAGAT GCACTGATTCTCGCCCAGGAGGTTGATGGTGTCATCCTGGTCTTAGCCTCGGGGGAAGTGGACAAGGGTTATGCGCAAAA AGCCAAGGGACTGCTGGATCAGTTGGAGATTAAGATCCTCGGGGCGGTTCTCAATAAAGTGGAGATGGATACCAATGAGT ATTACTATTACAACTATTATAACTCTTTAGAGGATAGGAAGAAGAAGGGGAACAAGATGTCTGATCTGTAG Protein sequence : MVYSLITFEQTKSPISEAYRALRTNVQFTSVDSNTQIIAVTSSGPGEGKSHTVANLAVSIAQSGKSVLIIDADLRNPTQH KLFGVDNRVGLSVYLVEDQDYRKPVWDTAVPSVRLLPAGPIPPNPAELVGSNRMKGLIEEVSGEFDMVLIDTPPVIAVTD ALILAQEVDGVILVLASGEVDKGYAQKAKGLLDQLEIKILGAVLNKVEMDTNEYYYYNYYNSLEDRKKKGNKMSDL |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| SSP0061 | YP_300151.1 | capsular polysaccharide synthesis protein | Not tested | SCC15305cap | Protein | 8e-37 | 41 |
| cap1B | AAA64641.1 | type 1 capsule synthesis gene | Virulence | SCCcap1 | Protein | 8e-36 | 41 |
