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Name : Desmer_4120 (Desmer_4120) Accession : YP_006623820.1 Strain : Desulfosporosinus meridiei DSM 13257 Genome accession: NC_018515 Putative virulence/resistance : Virulence Product : nucleoside-diphosphate sugar epimerase Function : - COG functional category : - COG ID : - EC number : - Position : 4292469 - 4294367 bp Length : 1899 bp Strand : - Note : PFAM: Polysaccharide biosynthesis protein DNA sequence : ATGATTCCGTATTGTACTACTGTAAAGGAAGGTTTATTCATGAAATTTAACCGGAAATCCTTAGCGTTAATGTTAATTGA TGGAGTACTGGTTAACTTAGCGGCATTTGGAAGTTTCTACCTGCGTTTTGAAGGAGATATTCCTCAGGAATATTTCTTGA CATATTATCACACAGCTTGGGCCGGAACCCTCATTTACTTAGTCATCTTCTCATTATTTGGCCTCTATAAACGGCTTTGG CAGTATGCCAGTATCAATGAACTTCTTTCAATCGTTTATGCCGTAACGGTTGGAACGAGTAGTGTAATACTCGTCATTTA TTTTTTAGCCCCGATGCGTTATCCCAACACGGTAGCCGTGTTATTATGGCTGACCACCACGTTTTTAATCGGAGGCTCTC GTTTCCTGGGACGGATATTACAAGATAGTGTTTTCAATCTGCATTTGTCCGGAATACCGAAGCGAGTGCTGATTATTGGG GCAGGAGATGCCGGGGCCTTAGCGGTTCGTGAACTGAAAAACAGCAATTATCGTGAAGGTTACCCCATCGGGATCATCGA TGATGCTCCGGAAAAGCAAAAGCTTAAATTGATGGGAATTCCCGTCTTGGGAACCAGGAAGGATATCACACGAGTTGTCA AATCCCATGAAATTGAAGAGGTCATTATTGCCATGCCTTCAGCGCCGGGGGATGTGATTCGGGATATGACGGAGATTTGC GAAAAGAGTGGGATTGTCATTAGGATCATTCCCGGCATTTACAACTATTTCAGCGGATTGGTGGACAGCTTAAAAATCCG CGAAGTGCAGATCGAAGATTTATTGGGAAGGGAGCAGGTGAATCTTGATATTGAGGAAGTAGCGGGTTATTTAGAGGGAG AAACCGTCTTAATTACAGGAGCCGGTGGGTCCATCGGCTCGGAACTCTGCCGGCAAATATGTCGATTTAACCCGCAGAAG CTTATCCTGGTGGGACGGGGCGAGAACAGCATTTTTGATGTCGAGCAAGAACTGCGTTCGGAATGTCCCGAGATTAACCT GGTTACAGAAATCCTGGACGTGAAGGATCGAGAAAAGGTGGAATTGGTTTTTCGCAGGTTCAAACCGGGAGTTGTTTTTC ATGCCGCTGCTCATAAGCATGTTCCGCTCATGGAGCGAAATCCTGAAGAAGCCTTGAAGAACAATATCCTAGGAACTTAT AACGTGGCAGAGATCTCGGATGCTGCCCATGTTAAAATTTTTGTCCTTATTTCTACAGATAAGGCCATCAATCCGACGAG TATTATGGGGGCCACCAAACGTGTAGCCGAGATGATCATTCAAAGTTTCGACGAACAATCCCAGACTCGTTTTGTCGCCG TCCGCTTTGGCAATGTCCTGGGGAGCCGGGGAAGTGTCATTCCCACGTTCAAGAAGCAGATTGCCAAGGGTGGTCCCGTG ACAGTGACTCATCCTGAGATGGTTCGCTACTTTATGACGATTCCGGAAGCGGCCCAGCTGGTGATTCAGGCCGGTGCCAT GGCTCGGGGCGGGGAGGTTTTCATTCTGGATATGGGAAAGCCGGTCAAAATTGTTGATTTGGCAAGAGACTTAATCCGGT TGTCAGGGTTCGATGTGGATGTGGACGTTAAGATTGAATATACAGGCATACGTCCCGGGGAAAAGTTATTTGAGGAGCTG CTCACGGCGGAAGAGGGGACTACGAGTACGAAACATCAGAGAATTTTTGTCGCAAAGCCCAATGGAATTAATGTTGCAGG GATTGAGGGGTTGGTTCAGTTGATTAGGGAAAGGGGTTCGTACTTGACCAGGGAAGAGATCATCCAAGAGTTGGCTGAGG TTGTGCCGGGGTTCCAACAACTTCCGGGGAAGCAAGAGATAGGGAGGGTTTTTAGATGA Protein sequence : MIPYCTTVKEGLFMKFNRKSLALMLIDGVLVNLAAFGSFYLRFEGDIPQEYFLTYYHTAWAGTLIYLVIFSLFGLYKRLW QYASINELLSIVYAVTVGTSSVILVIYFLAPMRYPNTVAVLLWLTTTFLIGGSRFLGRILQDSVFNLHLSGIPKRVLIIG AGDAGALAVRELKNSNYREGYPIGIIDDAPEKQKLKLMGIPVLGTRKDITRVVKSHEIEEVIIAMPSAPGDVIRDMTEIC EKSGIVIRIIPGIYNYFSGLVDSLKIREVQIEDLLGREQVNLDIEEVAGYLEGETVLITGAGGSIGSELCRQICRFNPQK LILVGRGENSIFDVEQELRSECPEINLVTEILDVKDREKVELVFRRFKPGVVFHAAAHKHVPLMERNPEEALKNNILGTY NVAEISDAAHVKIFVLISTDKAINPTSIMGATKRVAEMIIQSFDEQSQTRFVAVRFGNVLGSRGSVIPTFKKQIAKGGPV TVTHPEMVRYFMTIPEAAQLVIQAGAMARGGEVFILDMGKPVKIVDLARDLIRLSGFDVDVDVKIEYTGIRPGEKLFEEL LTAEEGTTSTKHQRIFVAKPNGINVAGIEGLVQLIRERGSYLTREEIIQELAEVVPGFQQLPGKQEIGRVFR |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| cap1D | AAA64643.1 | type 1 capsule synthesis gene | Virulence | SCCcap1 | Protein | 1e-100 | 49 |
| SSP0063 | YP_300153.1 | capsular polysaccharide biosynthesis protein | Not tested | SCC15305cap | Protein | 5e-109 | 45 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| Desmer_4120 | YP_006623820.1 | nucleoside-diphosphate sugar epimerase | VFG1300 | Protein | 4e-106 | 46 |
| Desmer_4120 | YP_006623820.1 | nucleoside-diphosphate sugar epimerase | VFG0029 | Protein | 1e-76 | 41 |
