Gene Information

Name : Desmer_4118 (Desmer_4118)
Accession : YP_006623818.1
Strain : Desulfosporosinus meridiei DSM 13257
Genome accession: NC_018515
Putative virulence/resistance : Virulence
Product : glycosyl transferase
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 4290683 - 4291315 bp
Length : 633 bp
Strand : -
Note : PFAM: Bacterial sugar transferase

DNA sequence :
GTGACCATGCCGTCTTACGTTAAGGTCAAGAGAGTGTTGGATTTATTGTTTTCAATTCTTTTGTTGATTATTGCAGCCCC
GATTATGCTTTGTGCAGCCATTGCCATTAAGTTAGGATCTCGGGGTCCCCTACTCTTTAAACAAGAGCGGCCAGGTAAAG
ATGGTGTAGTATTTACGATTTACAAGTTTCGTACCATGCGCCTGGAGAGGGAGAAAGATGGTCGTCCCTTAGCCGATATG
GAACGTCTGACTCCTGTCGGTGGGATTTTGCGAAAGCTTAGTGTGGATGAGCTGCCCCAGCTTTTTAATATCTTAAAAGG
GGATATGAGTTTCATTGGTCCCCGTCCACTGATGGTGCAGTATTTAGAGCGTTACACGCCTGAACAGATGCGGCGGCATG
AAGTGACACCGGGAATATCCGGCTGGGCACAGATTCATGGCCGTAATCAGGTTGGCTGGGAGACACGTTTTAAATATGAT
GTCTGGTATGTTGAGCATATTTCCTTTTGCTTGGATTTAAGGATTTTCCTTAAGACTTTGGCGATTGTTCTGCTCAGGAG
CGGGGTTAATCAGTCTGGGAATCAGACCATGGAAGAGTTTGGTGGGGCTGAGAATAGAACATTTAGGGCCTGA

Protein sequence :
MTMPSYVKVKRVLDLLFSILLLIIAAPIMLCAAIAIKLGSRGPLLFKQERPGKDGVVFTIYKFRTMRLEREKDGRPLADM
ERLTPVGGILRKLSVDELPQLFNILKGDMSFIGPRPLMVQYLERYTPEQMRRHEVTPGISGWAQIHGRNQVGWETRFKYD
VWYVEHISFCLDLRIFLKTLAIVLLRSGVNQSGNQTMEEFGGAENRTFRA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
SSP0070 YP_300160.1 capsular polysaccharide synthesis protein Not tested SCC15305cap Protein 2e-25 44
cap1N AAL26667.1 type 8 capsule synthesis gene Virulence SCCcap1 Protein 2e-24 44

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Desmer_4118 YP_006623818.1 glycosyl transferase VFG1369 Protein 2e-23 41