Gene Information

Name : Desmer_3989 (Desmer_3989)
Accession : YP_006623691.1
Strain : Desulfosporosinus meridiei DSM 13257
Genome accession: NC_018515
Putative virulence/resistance : Unknown
Product : cytidine deaminase
Function : -
COG functional category : -
COG ID : -
EC number : 3.5.4.5
Position : 4147143 - 4147598 bp
Length : 456 bp
Strand : -
Note : PFAM: Cytidine and deoxycytidylate deaminase zinc-binding region; TIGRFAM: cytidine deaminase, homotetrameric

DNA sequence :
TTGAATCAGAGCCAATCTCAACTGTTTGAAAAAATGGTAAATGAATTTAAGGGACTGCTTGATTCTGATAGTATCAATGA
GCTGGTTTCTAAGGCTAAAGCTGCCTATGAAAATGCCTATGTGCCTTACTCTCATTATCCCGTTGGGTCAGCAGTTTTAT
TTTCCTCCGGTAAGATCTATTCCGGATGTAACGTTGAGAATGCCAGCTATGGCTTAACTGTCTGTGCTGAACGCAATGCT
ATTTTCCAGGCTATTGCCCAAGGAGAACGAGAAGTAAAGGGAATTGCCATTGCGGTACCCACAGATGTTTTTCCATCTCC
CTGTGGTGCATGCAGGCAAGTAATCCGTGAGTTTGCCGTGGATTGTCCAGTCATTTTGATAAATGGGAAAGGGCATGTAC
GGTGGACAAGTTTGAAGGCATTGCTTCCGGAGGCCTTTGAACCGGAGTTTTTATAG

Protein sequence :
MNQSQSQLFEKMVNEFKGLLDSDSINELVSKAKAAYENAYVPYSHYPVGSAVLFSSGKIYSGCNVENASYGLTVCAERNA
IFQAIAQGEREVKGIAIAVPTDVFPSPCGACRQVIREFAVDCPVILINGKGHVRWTSLKALLPEAFEPEFL

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
cdd YP_005163382.1 Cytidine deaminase Not tested Not named Protein 8e-18 46