Gene Information

Name : Desmer_3728 (Desmer_3728)
Accession : YP_006623435.1
Strain : Desulfosporosinus meridiei DSM 13257
Genome accession: NC_018515
Putative virulence/resistance : Unknown
Product : 50S ribosomal protein L19
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 3882846 - 3883193 bp
Length : 348 bp
Strand : -
Note : PFAM: Ribosomal protein L19; TIGRFAM: ribosomal protein L19, bacterial type

DNA sequence :
ATGGATTATATTCGCATGATTGAAGAAGAACAAATGAAAAAGGATCTTCCTAACTTCCGGCCGGGTGATACAGTTCGTGT
ACATGTCCGTATTGTTGAGGGAACTCGTGAACGTATCCAGGTTTTCGAAGGGGTTGTCATTGCAATGAAAAATGGCGGCA
TTCGTGAAACTTTTACAGTTCGACGTGTCTTCGCTGGAGTCGGGGTAGAACGAACTTTCCCTTTGCATTCACCTCGCTTG
GAAAAAATCGAGGTGGCTCGACGAGGTATTGTTCGCCGGGCTAAGCTTAACTATCTACGTGGTCTTTCAGGTAAGGCGGC
TCGGATTCGCGACCGTCGTATCGGCTAG

Protein sequence :
MDYIRMIEEEQMKKDLPNFRPGDTVRVHVRIVEGTRERIQVFEGVVIAMKNGGIRETFTVRRVFAGVGVERTFPLHSPRL
EKIEVARRGIVRRAKLNYLRGLSGKAARIRDRRIG

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
rplS CAA68924.1 ribosomal protein L19 Not tested Internalin Protein 1e-31 68
rplS AAS66827.1 50S ribosomal subunit protein Not tested SSR-1 Protein 4e-28 57