Gene Information

Name : Desmer_3172 (Desmer_3172)
Accession : YP_006622924.1
Strain : Desulfosporosinus meridiei DSM 13257
Genome accession: NC_018515
Putative virulence/resistance : Unknown
Product : L-lactate transport
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 3316389 - 3318047 bp
Length : 1659 bp
Strand : -
Note : PFAM: L-lactate permease; TIGRFAM: L-lactate transport

DNA sequence :
ATGCCTTGGAGTCAAAATTATGCAGCGTTGAACAATAGCATAGGGCTTACTGCACTTGTAGTTTCAATTCCGATTTTTTT
CTTATTTTGGGCACTCGCTGTCAAACGGATGAAGGGCTATATTGCAGGCGTATTAACCTTAGCAATAACCCTAGTTGATG
TGGTACTTGTCTATAAAATGCCAGTAGGAACTGCTCTTTCAGCAAGTTTCTTAGGAATTGTTAATGGGTTATTCCCAATT
GCTTGGATTGTTATTGCAGCCGTATTTTTGTATAACTTAACGGTTGAATCCGGACATTTTGATATTATTAAAAGTTCTAT
CGCTACAATTTCAGATGATCGTCGTATCCAGGCCTTATTGGTAGCATTTTCCTTTGGCGCTTTCTTAGAAGGGGCTGCCG
GTTTTGGTGCTCCGGTTGCAATTTCTGGCGCTATTTTAATTGGTTTAGGTTTTGAGCCTTTATATGCAGCCGGATTATGC
CTGATTGCCAATACTGCACCAGTTGCTTTTGGTGCAATTGGAAGTCCGATTATTGCTGCCGGAAGTGTAACGGGTTTAGG
TGACTTCGTTATTTCTCAAGCTGTAGGACGACAACTGCCATTTTTATCCGTATTGATTCCCCTTTATCTGATTATACTTA
TGGCAGGCTGGAAAGCAGCCAAAGAAGTTCTTCCTGCTATTTTAGTAACAGGCGTATCCTTTGCCGTTGCCCAATGGTGG
TCTGCAAACTACTTGGGAGCTTATTTACCGGATATTATTTCTTCATTGACTTCTTTATTAGCGACAACTGTGTTCTTGAA
GTTCTGGAAACCTAAAACGGTTTGGCGTTTTCCAAGTGAGAAAAAGGCTGTGGTTAATACAACCCATTACAGCACAGGTG
AAGTTATCAAAGCTTGGTCCCCCTTCGTAATCTTAACGGTTATGGTGGCAGTTTGGGGAACTCCAAGTTTTAAGAATTGG
GTTACTAAGGACTTACAATGGTTTGTTAATATACCCCATTGGCCTGGTCTTGATGGTTTGGTTTATAAAGTTTCCCCAAT
TGTGACGAAGTCCACTGTTTATGCTGCATCCTATAAGTGGGACTTCTTTGCAGCCGGCGGTACGGCAATTCTCATAACAG
CCATCATTTCCATGTTTATTTTAGGTGTATCTCCTGCAAAAGCGGTTTCAGTTTTTGGTAAAACCCTCAAGCAGCTCGTA
TATCCAATTATTACTATGGGATCTGTGCTTGGTTTTGCTTATTTAGCAAATTACTCAGGACTTTCCTTTACCCTTGGACT
TATGTTTGCTTCAACCGGAAAAGCATTCCCATTCCTTTCTCCGGTTCTAGGATGGGTGGGTGTATTCCTGACAGGCTCCG
ATACTTCGGCCAACGCCTTGTTCGGAAAGCTTCAACAAGTTACAGCTGAACAAATTGGGGTTAATCCTGTACTAACCGTT
GCGGCAAATAGCTCAGGTGGTGTTGTTGGAAAAATGATCTCGCCACAATCTATTGCCGTTGCGGCTGCAGCCACGTCCCT
AGTCGGGAAGGAATCGGATCTCTTCCGTTTCACAGTTAAACATTCTCTCATATTCCTTGTTATAGTTTCGATAATGATCG
GTCTGCAAGCTTACGTAGTACCAGAGATGATCCCTACTGTGGCGTCAGTGCTTAAATAG

Protein sequence :
MPWSQNYAALNNSIGLTALVVSIPIFFLFWALAVKRMKGYIAGVLTLAITLVDVVLVYKMPVGTALSASFLGIVNGLFPI
AWIVIAAVFLYNLTVESGHFDIIKSSIATISDDRRIQALLVAFSFGAFLEGAAGFGAPVAISGAILIGLGFEPLYAAGLC
LIANTAPVAFGAIGSPIIAAGSVTGLGDFVISQAVGRQLPFLSVLIPLYLIILMAGWKAAKEVLPAILVTGVSFAVAQWW
SANYLGAYLPDIISSLTSLLATTVFLKFWKPKTVWRFPSEKKAVVNTTHYSTGEVIKAWSPFVILTVMVAVWGTPSFKNW
VTKDLQWFVNIPHWPGLDGLVYKVSPIVTKSTVYAASYKWDFFAAGGTAILITAIISMFILGVSPAKAVSVFGKTLKQLV
YPIITMGSVLGFAYLANYSGLSFTLGLMFASTGKAFPFLSPVLGWVGVFLTGSDTSANALFGKLQQVTAEQIGVNPVLTV
AANSSGGVVGKMISPQSIAVAAAATSLVGKESDLFRFTVKHSLIFLVIVSIMIGLQAYVVPEMIPTVASVLK

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
glcA CAE85240.1 GlcA protein, putative glycolate permease Not tested PAI V 536 Protein 2e-117 56