Gene Information

Name : Desmer_2483 (Desmer_2483)
Accession : YP_006622272.1
Strain : Desulfosporosinus meridiei DSM 13257
Genome accession: NC_018515
Putative virulence/resistance : Virulence
Product : pyruvate kinase
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 2607928 - 2609658 bp
Length : 1731 bp
Strand : -
Note : PFAM: Pyruvate kinase, barrel domain; PEP-utilising enzyme, mobile domain; Pyruvate kinase, alpha/beta domain; TIGRFAM: pyruvate kinase

DNA sequence :
ATGAGAAGGACAAAAATTGTTTGTACCATTGGTCCGGCAAGTGAATCTCCAGAGAAAGTTCAGGAACTGCTTGCCTCCGG
TATGGATGTTGCACGCCTGAATTTTTCTCATGGAACCCACGAAGAACATGGCAGAAGAATTGAAACTTTAAGAAGGGAAG
CTACCAAGTTTGGGAAACATTTAGGAATACTTCTTGATACTAAAGGGCCGGAGGTACGAACGGGAAAAGTTCCTGAGGGC
GGTATTACCCTGAGCAATGGATCTGAGTTTATCTTAGACACCGATCTAACTCTTGGTAATCAGCAGCGAGTAGGAATTAC
TTATACTAATTTATGGCGTAAAATTGATCCCGGTAGTCACATTCTTATCGACGATGGACAGATAGACCTTGAAGTGACTT
CCACGGAAGAGAATATTATTCGGACAATTGTTCGCAACGGAGGCATTCTTAAGTCTCAAAAAGGAGTTAATGCACCCAAT
GCGCTGATTGACTTACCTGCAGTTACTGAAAAGGATATTGAGGATATACGCTTTGGTATTTCTCAAGGAATTGACTTTAT
TGCTGCATCATTTACTCGTAAGGCCTTAAATATTCTTGATGTCCGCAGAGTAGTGGAAGAAATGGGTGCCGATGTCCATA
TTATTGCCAAGATCGAGAGTCAAGAAGGAATCAATAATTTAGATGATATTCTCGAGGTTGCTGATGGGCTTATGGTTGCT
CGGGGAGATCTGGGTGTAGAAATCCCCGTCGAAGAAGTTCCTATCAGACAAAAGGAAATGATTCGTAAATGCAATTTGCT
AGGTAAACCTGTTATTGTAGCTACCCAAATGTTAGATTCCATGATACGTCAGCCAAGGCCTACACGAGCAGAAGCCAGTG
ATGTGGCCAATGCCATTCTGGATGGTACGGATGCAATCATGCTCTCCGGTGAAACAGCAGCTGGGTTATTTCCAATTGAA
GCGGTCAAAATGATGGACAAGATTGCTCAGCGAACTGAAAAAACTTGTAGGAATGATCAAGCATCTCGGCATTCTGCCAA
TGTTGCAGAAGCAATCAGCTTTGCCAGCTACACGATTGCCAAAGACCTCAAAGCTGCTACAATTCTTACTCCCACCCATT
CAGGCTTAACTGCACGTATGATTTCCAAATACAGACCGATGGCTATGATTATTGCGGCAACCCCTTTTGACAATACCGCA
AGAAAGCTTTCCCTTTTATGGGGTGTACAACCCATTATTGTTCCGGAGAGTTCCGGAACGGATGAAATGTTGGCAGTAAC
TGTTAACACATCGTTAAATAGAAGCCTCATCAAGGCCGGCGATGTTGTTGTAATAACTGCCGGAGTGCCAATTGGCAAAG
TCGGGTCAACAAATATGATTAAAGTTCAAATAATGGGCAATATTTTGTCTAAGGGAATTGGGATTGGGCGTAAATCCTAT
TCGGGTATAGCACGTAAAGTTCAAGATCCTGAACAAGCTGTATTCAATGATGGGGAAGTATTAATTGCGGAATCAACAGA
TGCACGATTTGTACCCTTAATCTCGCGGGCTGGTGCCTTAGTCGTTGAAGAAGCAGGCTTAACATCTCATGCAGCCATAA
CCGGGTTACAATATGGAATTCCGACAATTGTTGGAGCCGGAGGAGCCTTTTCTAAGGTTGAAGATGGTCAGATACTAACT
GTTGATGCTTTAACTGGAATGATGTATGAGGGTTCAGTAAGCATTTTATAA

Protein sequence :
MRRTKIVCTIGPASESPEKVQELLASGMDVARLNFSHGTHEEHGRRIETLRREATKFGKHLGILLDTKGPEVRTGKVPEG
GITLSNGSEFILDTDLTLGNQQRVGITYTNLWRKIDPGSHILIDDGQIDLEVTSTEENIIRTIVRNGGILKSQKGVNAPN
ALIDLPAVTEKDIEDIRFGISQGIDFIAASFTRKALNILDVRRVVEEMGADVHIIAKIESQEGINNLDDILEVADGLMVA
RGDLGVEIPVEEVPIRQKEMIRKCNLLGKPVIVATQMLDSMIRQPRPTRAEASDVANAILDGTDAIMLSGETAAGLFPIE
AVKMMDKIAQRTEKTCRNDQASRHSANVAEAISFASYTIAKDLKAATILTPTHSGLTARMISKYRPMAMIIAATPFDNTA
RKLSLLWGVQPIIVPESSGTDEMLAVTVNTSLNRSLIKAGDVVVITAGVPIGKVGSTNMIKVQIMGNILSKGIGIGRKSY
SGIARKVQDPEQAVFNDGEVLIAESTDARFVPLISRAGALVVEEAGLTSHAAITGLQYGIPTIVGAGGAFSKVEDGQILT
VDALTGMMYEGSVSIL

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
STY1744 NP_456147.1 pyruvate kinase Not tested SPI-2 Protein 2e-95 49
pykF NP_805051.1 pyruvate kinase Not tested SPI-2 Protein 9e-95 48
pykF CAA68205.1 pyruvate kinase like protein Not tested SPI-2 Protein 2e-94 48
pykF YP_216386.1 pyruvate kinase Not tested SPI-2 Protein 9e-95 48

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Desmer_2483 YP_006622272.1 pyruvate kinase VFG0479 Protein 4e-95 48