Gene Information

Name : Desmer_2453 (Desmer_2453)
Accession : YP_006622243.1
Strain : Desulfosporosinus meridiei DSM 13257
Genome accession: NC_018515
Putative virulence/resistance : Resistance
Product : antimicrobial peptide ABC transporter ATPase
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 2574478 - 2575161 bp
Length : 684 bp
Strand : -
Note : PFAM: ABC transporter

DNA sequence : 
ATGGCGGAAGTGCTGAACATGCAAAATATCTCTAAGAGCTACTATATGGGGGAAGAAGAGCTAGAAGTATTGAGTAAGGT
AAACTTAACAGTAAATTCCGGTGAATTTCTATCCTTACTTGGTCCGTCAGGATCGGGGAAATCCACAATGATGAACATTA
TTGGTTGCCTAGATATGCCGACATCAGGAAAATATTTACTCTCTGGCAATGATATTGAAGACCTGGATGAAACTGAACTT
GCCTTTATTAGAAATAAGGAAATTGGCTTTGTATTTCAAAACTTTCAGCTCCTGCCACGCTTAAGTGCTCTTCAAAATGT
GGAGTTACCATTGATTTACGCTGGCCTCTCCTCAGCGGAAAGAAAGGAACGTTCGCTGAAAATCCTCGATCGAGTAGGGT
TAGTTGATAAGACAAAAAACTTACCAACTCAGCTATCTGGGGGGCAACAACAACGGGTTGCCATTGCCCGAGCTTTGGTA
ACTGAGCCCACAATTTTGCTGGCCGATGAACCAACAGGTGCTTTAGATCAAAAAACAGGTGCACAAGTTATGGAGCTTTT
TGAGGAACTGAATCACGACGGAAGAACAATAATTATGATAACCCACGACATCGGGATTGCACGTCATGCCAAGAGAGTTG
TCAACATTCTCGATGGACATTTATCGGAACAGGAGGTTCAGTAG

Protein sequence : 
MAEVLNMQNISKSYYMGEEELEVLSKVNLTVNSGEFLSLLGPSGSGKSTMMNIIGCLDMPTSGKYLLSGNDIEDLDETEL
AFIRNKEIGFVFQNFQLLPRLSALQNVELPLIYAGLSSAERKERSLKILDRVGLVDKTKNLPTQLSGGQQQRVAIARALV
TEPTILLADEPTGALDQKTGAQVMELFEELNHDGRTIIMITHDIGIARHAKRVVNILDGHLSEQEVQ

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
Cp1002_1464 YP_005681730.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 1e-25 41
CpI19_1473 YP_005685914.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 2e-26 41
CpC231_1466 YP_005683828.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 2e-26 41
cpfrc_01473 YP_003783873.1 hypothetical protein Not tested PiCp 5 Protein 2e-26 41

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Desmer_2453 YP_006622243.1 antimicrobial peptide ABC transporter ATPase NC_012469.1.7686878. Protein 2e-53 57
Desmer_2453 YP_006622243.1 antimicrobial peptide ABC transporter ATPase CP001581.1.gene598.p Protein 2e-31 46
Desmer_2453 YP_006622243.1 antimicrobial peptide ABC transporter ATPase NC_008702.1.4606598. Protein 5e-38 46
Desmer_2453 YP_006622243.1 antimicrobial peptide ABC transporter ATPase CP001581.1.gene798.p Protein 3e-35 44