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Name : Desmer_0233 (Desmer_0233) Accession : YP_006620166.1 Strain : Desulfosporosinus meridiei DSM 13257 Genome accession: NC_018515 Putative virulence/resistance : Unknown Product : transcription antitermination protein nusG Function : - COG functional category : - COG ID : - EC number : - Position : 223164 - 223691 bp Length : 528 bp Strand : + Note : PFAM: Transcription termination factor nusG; KOW motif; TIGRFAM: transcription termination/antitermination factor NusG DNA sequence : ATGGCAAAAAATTGGTTTGTAATTCATACCTATTCTGGCTATGAGAACAAGGTGAAAATGAATCTTGAAAAACGAGTCGA ATCCATGAACATGGAGGAGAAGATTTTCCGAGTTCTTGTTCCCATGGAAGATGAAATTGAATTCAAAAATGGTAAACAAA AGATTACCAAGCGCAAGGTATATCCAGGCTATGTGCTCGTTGAAATGGAAATGACGGATGACTCATGGTATGTTGTTCGT AATACTCCGGGTGTAACAGGATTTGTCGGTTCTGGAACGAAGCCTATCCCTTTATTGGATAATGAGGTTGTAAGTATATT GCAGCAAATGGGAATGGATGAAATTCAGACTCGGGTCGACTTTGATATTAATCAAAGTGTCCAAGTTATTGCCGGTCCTT TCAAGGACTTCGTTGGTGTAGTGAGAGAAATCCTTGCAGACAAAGGCAAGTTACGGGTTGAGGTATCTATGTTTGGCAGA GAAACTCCCGTTGAACTTGAGTTCACGCAGGTTCAAAAATTAGATTAA Protein sequence : MAKNWFVIHTYSGYENKVKMNLEKRVESMNMEEKIFRVLVPMEDEIEFKNGKQKITKRKVYPGYVLVEMEMTDDSWYVVR NTPGVTGFVGSGTKPIPLLDNEVVSILQQMGMDEIQTRVDFDINQSVQVIAGPFKDFVGVVREILADKGKLRVEVSMFGR ETPVELEFTQVQKLD |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| nusG | YP_006310753.1 | transcription antitermination protein NusG | Not tested | FWisland_4 | Protein | 7e-35 | 49 |
| nusG | YP_281502.1 | transcription antitermination protein NusG | Not tested | Not named | Protein | 3e-30 | 47 |
| BJAB07104_00341 | YP_008207806.1 | Transcription antiterminator | Not tested | AbaR25 | Protein | 1e-35 | 43 |
| BJAB0868_00345 | YP_008211671.1 | Transcription antiterminator | Not tested | AbaR26 | Protein | 1e-35 | 43 |
