Gene Information

Name : Desmer_2283 (Desmer_2283)
Accession : YP_006622089.1
Strain : Desulfosporosinus meridiei DSM 13257
Genome accession: NC_018515
Putative virulence/resistance : Resistance
Product : arsenical-resistance protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 2401613 - 2402689 bp
Length : 1077 bp
Strand : +
Note : PFAM: Sodium Bile acid symporter family; TIGRFAM: arsenical-resistance protein

DNA sequence :
GTGGAAATCGTTAAACAAGCCAGGTTATCGTTTTTAGACAGATTTTTGACCCTTTGGATATTTATCGCCATGGCAGTAGG
GGTTTTGGGGGGGTATTTCTTTCCTGACTTAGCAACGTCACTGAGTGAATTCAGCACAGGAACAATATCCTGGCCGATAG
CCATCGGTCTGATCATCATGATGTATCCGCCTCTGGCCAAGGTGAAGTATGAAGAGATCGGAAAAGTGACAGAAAATAAA
AAGATCTTTTCCTTTTCACTGATCCAAAACTGGATTATCGGACCTATTTTGATGTTTGTCCTGGCTGTATTGCTCCTGGG
AGATAAACCCGGCTTTGCCATTGGTCTTATTATTATAGGCCTTGCCCGGTGTATTGCCATGGTTATCGTTTGGAATTCCC
TGGCCAAAGGGGATAATGAATATTGTGCTGCTTTGGTAGCGCTGAATTCAATCTTCCAAATTCTTTTATACACTGTCTAT
ATTTATATCTTTGTCACTCTGATACCTAAGTGGCTGGGACTTTCCTGGGGAGGCCAGGTCGTGGATGTTTCAATGTGGGA
AGTAGCCAAGAGCGTTCTGATTTATTTGGGGATTCCTTTTACAGCAGGCTTTTTGACACGCTTTAGCTTAATAAGGATTA
AAACAAAAGAGTGGTACGAGAAGGTATTCATTCCCAAGATTTCTCCCTTAGCTTTGATAGCACTCCTTTATACCATCGTC
ATTATGTTTATATCCAAAGGAGAGCAGATTATTAATAATCCCGGAGATGTGGTTAGAATTGCCATACCCATGTTAATCTA
CTTCGCCATTATGTTCTTTGTCAGTTTTTATATGTCTTTCAAAGGCGGTTTCAGATATGACCAAACAGTAACCCTTGCTT
TTACAGCCGCAAGCAATAATTTTGAACTTGCCATAGCTGTTGCCGTAGCTGTCTTCGGGATCGCTTCAGATGTAGCCTTC
ACGGCAGTCATCGGTCCTTTGGTAGAAGTGCCGGTCATGATTGCTTTGGTGAATTCAGCTCTCTTCTTCAAACGCAAGTA
TTTTGCTGAAACTGGCCTGCCAAAGTACAGCCAATAG

Protein sequence :
MEIVKQARLSFLDRFLTLWIFIAMAVGVLGGYFFPDLATSLSEFSTGTISWPIAIGLIIMMYPPLAKVKYEEIGKVTENK
KIFSFSLIQNWIIGPILMFVLAVLLLGDKPGFAIGLIIIGLARCIAMVIVWNSLAKGDNEYCAALVALNSIFQILLYTVY
IYIFVTLIPKWLGLSWGGQVVDVSMWEVAKSVLIYLGIPFTAGFLTRFSLIRIKTKEWYEKVFIPKISPLALIALLYTIV
IMFISKGEQIINNPGDVVRIAIPMLIYFAIMFFVSFYMSFKGGFRYDQTVTLAFTAASNNFELAIAVAVAVFGIASDVAF
TAVIGPLVEVPVMIALVNSALFFKRKYFAETGLPKYSQ

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
arsB AFC76433.1 ArsB Not tested AbaR5 Protein 1e-87 58
arsB CAJ77016.1 transmembrane protein of arsenate pump Not tested AbaR1 Protein 7e-88 58
arsB ADZ05767.1 arsenic resistance protein Not tested AbaR11 Protein 2e-66 56

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Desmer_2283 YP_006622089.1 arsenical-resistance protein BAC0573 Protein 3e-101 66
Desmer_2283 YP_006622089.1 arsenical-resistance protein BAC0004 Protein 2e-70 51