Gene Information

Name : Desmer_2066 (Desmer_2066)
Accession : YP_006621877.1
Strain : Desulfosporosinus meridiei DSM 13257
Genome accession: NC_018515
Putative virulence/resistance : Virulence
Product : pyruvate kinase
Function : -
COG functional category : -
COG ID : -
EC number : 2.7.1.40
Position : 2168021 - 2169757 bp
Length : 1737 bp
Strand : +
Note : PFAM: Pyruvate kinase, barrel domain; PEP-utilising enzyme, mobile domain; Pyruvate kinase, alpha/beta domain; TIGRFAM: pyruvate kinase

DNA sequence :
ATGAGAAGGACTAAAATTGTCTGTACTATTGGTCCGGCAAGTGAGTCAGGGGAAAAGGTTCAAGCTCTGCTGGCAGCGGG
AATGGATGTTGCTCGTCTTAATTTTTCCCATGGAACCCATGAAGAACATGGTCGCAGAATCGCAACTTTGAAAGAGGAAG
CGGCGAAGGCGGGAAAACACTTAGGTATTCTGCTGGATACCAAAGGGCCTGAAATACGGACAGGTAAAGTTCCTGAAGCT
GGTGTGGTTCTGGCCAATGGGTTAACCTTTATTCTAGACACGGATTTGAACAGAGTTGGTAATCAGGAACGGGTGGGAAT
TACTTACCAGGATTTATGGCGTAAAGTAAAACCAGGCAGCCGTATTCTTATAGACGATGGACAAATCGAACTGGAAGTTA
CAGCCGCTGAGAAGGAAATAATTACCACCACGATTCTTAATGGTGGTGTTTTAAAATCTCAAAAAGGGGTTAATATTCCC
AGTGCCCTGATTGATTTGCCGGCTGTGACGGAAAGAGACATTGAGGATATTCGCTTCGGAATTTCTCAAGGAATTGATTT
TATCGCTGCTTCTTTTACTCGGAAGGCCTTAAATATTTTGGACGTGCGCAGGATTTGTGAGGAGATGAATGCGGATGTAC
ATATCATAGCCAAAATCGAAAGCCGGGAAGGGATCGATAACTTAGATTCTATTCTTGAAGTCGCTGATGGTCTCATGGTA
GCCCGAGGGGATCTGGGGGTAGAGATACCCGTAGAAGAAGTTCCGATTCGGCAGAAGGAAATGATCCGCAAGTGTAATTT
GTTGGGGAAACCCGTTATCGTAGCAACTCAGATGTTAGATTCTATGATACGTCAACCGCGACCAACACGGGCGGAAGCTA
GTGATGTAGCCAATGCTATCTTAGATGGTACGGATGCCATTATGCTGTCCGGGGAAACAGCAGCAGGGCTATTCCCTATT
GAAGCCGTCCGAATGATGGATAGAATATCTCAGCGCACAGAACTAACTTGCTTGGACAATAAGGCAGCTCAACATCCTCA
AGTCAATGTTGCCGAGGCCATTAGTTTTGCCAGCTTTACCATTGCTAAAGATCTGCAAGCAGCGGCAGTTCTGACACCCA
CCCATTCGGGTTTGACCGCTTGTATGATTTCCAAGTACCGTCCCCTGGCCTTGATTGTGGCAGCTACTCCATTTCCTGAA
ACAGCCAGGAAGTTAGCCCTGAAATGGGGGGTAGAGTCAATCGTTGTGCCTCAGAGTTCGGGAACGGATGAAATGGTTTC
GGTTGCCGTGAATACTTCCTTAAATAAAAACTATATCAAGTCCGGAGATATAGTCGTCATTACAGCAGGTGTTCCCATCG
GCAAGGTAGGTTCTACCAATATGATCAAAGTCCAAATAATGGGGAATATCATTGCCAAAGGAATGGGGATTGGACGCAAA
TCCTATTCCGGTACCGCCCGCAGAGTTCAAGTACCGGGTAAGGACACTTTTAATGACGGAGAAATTCTAATTGCCCAATC
TACGGATGCAGAATTTGTTCCTTTAATTGCTCGCGCAGGAGCGTTAGTCGTTGAGGAAGGTGGTCTGACGTCACATGCCG
CTATAGTAGCAGTACAGTTCGGTATTCCGACGATTGTCGGTGCTGTTGAGGCTTTTTCTAAGGTTTCAGATGGTCAGACT
TTAACCGTTGATGCCATGACGGGCTTGATGTATGAGGGTTCTGTCAGCATTTTATAA

Protein sequence :
MRRTKIVCTIGPASESGEKVQALLAAGMDVARLNFSHGTHEEHGRRIATLKEEAAKAGKHLGILLDTKGPEIRTGKVPEA
GVVLANGLTFILDTDLNRVGNQERVGITYQDLWRKVKPGSRILIDDGQIELEVTAAEKEIITTTILNGGVLKSQKGVNIP
SALIDLPAVTERDIEDIRFGISQGIDFIAASFTRKALNILDVRRICEEMNADVHIIAKIESREGIDNLDSILEVADGLMV
ARGDLGVEIPVEEVPIRQKEMIRKCNLLGKPVIVATQMLDSMIRQPRPTRAEASDVANAILDGTDAIMLSGETAAGLFPI
EAVRMMDRISQRTELTCLDNKAAQHPQVNVAEAISFASFTIAKDLQAAAVLTPTHSGLTACMISKYRPLALIVAATPFPE
TARKLALKWGVESIVVPQSSGTDEMVSVAVNTSLNKNYIKSGDIVVITAGVPIGKVGSTNMIKVQIMGNIIAKGMGIGRK
SYSGTARRVQVPGKDTFNDGEILIAQSTDAEFVPLIARAGALVVEEGGLTSHAAIVAVQFGIPTIVGAVEAFSKVSDGQT
LTVDAMTGLMYEGSVSIL

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
STY1744 NP_456147.1 pyruvate kinase Not tested SPI-2 Protein 1e-91 47
pykF YP_216386.1 pyruvate kinase Not tested SPI-2 Protein 7e-92 47
pykF NP_805051.1 pyruvate kinase Not tested SPI-2 Protein 7e-92 47
pykF CAA68205.1 pyruvate kinase like protein Not tested SPI-2 Protein 7e-92 47

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Desmer_2066 YP_006621877.1 pyruvate kinase VFG0479 Protein 3e-92 47