Gene Information

Name : Desmer_2033 (Desmer_2033)
Accession : YP_006621847.1
Strain : Desulfosporosinus meridiei DSM 13257
Genome accession: NC_018515
Putative virulence/resistance : Resistance
Product : transcriptional regulator
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 2133804 - 2134181 bp
Length : 378 bp
Strand : +
Note : PFAM: Penicillinase repressor; TIGRFAM: copper transport repressor, CopY/TcrY family

DNA sequence : 
TTGAAAAACATACCCAATATATCTGATGCAGAATGGGAAGTTATGAAGATCTGTTGGTTGAAGTCGGCACCATGTACCGC
AAATGAAATTGTTAAGGCTTTAGAAGAACCGACAGATTGGAAACCAAACACGATTAAGACTTTAATTGGGAGACTCGTGA
AAAAAGGGGCTCTCGGTTTCAAAGAAGAGGGCAGGGTTTATATCTACTATCCGTTGGTGACCGAGCAAGAGTGTATCCAA
GCAGAGAGTAAGTCTTTTCTCACTCGAGTTTTTGGCGGAGCTCTAAAGCCCATGCTGGTTAACTTTCTTAAAGATGAAAA
ACTCTCTCAGGACGACATTGAAGAACTAAAACGACTCCTTGAAGACAGGAAGGAGTAA

Protein sequence : 
MKNIPNISDAEWEVMKICWLKSAPCTANEIVKALEEPTDWKPNTIKTLIGRLVKKGALGFKEEGRVYIYYPLVTEQECIQ
AESKSFLTRVFGGALKPMLVNFLKDEKLSQDDIEELKRLLEDRKE

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
mecI YP_039517.1 methicillin resistance regulatory protein MecI Not tested Type-II SCCmec Protein 5e-19 42
mecI NP_373280.1 methicillin resistance regulatory protein Not tested Type-II SCCmec Protein 5e-19 42
mecI YP_190060.1 methicillin-resistance regulatory protein MecI Not tested Type-II SCCmec Protein 5e-19 42
mecI BAA82218.1 methicillin resistance protein MecI Not tested Type-II SCCmec Protein 4e-19 42
mecI NP_370567.1 methicillin resistance regulatory protein Not tested Type-II SCCmec Protein 2e-18 41

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Desmer_2033 YP_006621847.1 transcriptional regulator CP001581.1.gene771.p Protein 5e-28 53
Desmer_2033 YP_006621847.1 transcriptional regulator AM180355.1.gene595.p Protein 9e-27 50
Desmer_2033 YP_006621847.1 transcriptional regulator NC_002952.2861158.p0 Protein 2e-19 42
Desmer_2033 YP_006621847.1 transcriptional regulator NC_002745.1122814.p0 Protein 2e-19 42
Desmer_2033 YP_006621847.1 transcriptional regulator NC_002758.1120003.p0 Protein 5e-19 41
Desmer_2033 YP_006621847.1 transcriptional regulator NC_009782.5560220.p0 Protein 5e-19 41