Gene Information

Name : Desmer_1967 (Desmer_1967)
Accession : YP_006621788.1
Strain : Desulfosporosinus meridiei DSM 13257
Genome accession: NC_018515
Putative virulence/resistance : Virulence
Product : transcriptional regulator
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 2075355 - 2075528 bp
Length : 174 bp
Strand : -
Note : PFAM: Helix-turn-helix; manually curated

DNA sequence :
ATGACGCAAGAAGAATTAGCCGTATTATGCACTGTCACTCGACAAACGATTATTTCATTAGAAAATGGCCGCTATAACCC
TTCTATTTTTCTCGCACACAAAATTGCTCAAATATTTCATTTGACAATAGAAGAAGTATTTCTTTTTGAGGAGGATATTC
ATGAAGTACGCTAA

Protein sequence :
MTQEELAVLCTVTRQTIISLENGRYNPSIFLAHKIAQIFHLTIEEVFLFEEDIHEVR

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
EF0524 NP_814301.1 Cro/CI family transcriptional regulator Not tested Not named Protein 2e-04 43
ef0042 AAM75247.1 EF0042 Virulence Not named Protein 2e-04 43
SH2314 YP_254229.1 hypothetical protein Not tested ¥ðSh1 Protein 1e-04 43

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Desmer_1967 YP_006621788.1 transcriptional regulator VFG2175 Protein 7e-05 43
Desmer_1967 YP_006621788.1 transcriptional regulator VFG2168 Protein 7e-05 43