Gene Information

Name : Desmer_1523 (Desmer_1523)
Accession : YP_006621387.1
Strain : Desulfosporosinus meridiei DSM 13257
Genome accession: NC_018515
Putative virulence/resistance : Resistance
Product : transcriptional regulator
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 1597259 - 1597672 bp
Length : 414 bp
Strand : +
Note : PFAM: Bacterial regulatory protein, arsR family

DNA sequence :
ATGACTCCCGATATAAATGAACATAATAAAAATCCAGAATCGATAACCCAGCCCACGGATAGCCTTGTATGTGATACTTT
ATGTATTCACACTGATTTGATTGAATCAGCTCGCCAAACTCTCATACCTGCCGGACAGATCCATCAATTGGCTGAGTTAT
TTAAAACCCTTGGAGATCCTACTCGAGTGAGAATTATGGATGTCTTAGCCAAAAATGAATTCTGTGTGTGCGATTTAGCT
GAGCTATTAGAGTTAAGTCAATCAGCTACTTCACATCAATTACGTGTACTTCGCAGCAATCATCTGGTGAAATATCGCAG
AGAGGGAAAGATGGTATATTACTCCTTAGATGATGACCATGTAATGGGACTTTATCGTGAGGGTCTTGAGCATATTTCCG
AAGGGCATAGATAG

Protein sequence :
MTPDINEHNKNPESITQPTDSLVCDTLCIHTDLIESARQTLIPAGQIHQLAELFKTLGDPTRVRIMDVLAKNEFCVCDLA
ELLELSQSATSHQLRVLRSNHLVKYRREGKMVYYSLDDDHVMGLYREGLEHISEGHR

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed BAB47608.1 cadmium resistance protein C Not tested Type-III SCCmec Protein 3e-19 45
cadC BAC57488.1 Cadmium efflux system accessory protein homolog, cadmium resistance protein C Not tested Type-IIIinv SCCmec Protein 3e-19 45

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Desmer_1523 YP_006621387.1 transcriptional regulator BAC0456 Protein 3e-27 48
Desmer_1523 YP_006621387.1 transcriptional regulator BAC0366 Protein 5e-18 43