Gene Information

Name : Desmer_1208 (Desmer_1208)
Accession : YP_006621096.1
Strain : Desulfosporosinus meridiei DSM 13257
Genome accession: NC_018515
Putative virulence/resistance : Unknown
Product : hydroxymethylbilane synthase
Function : -
COG functional category : -
COG ID : -
EC number : 2.5.1.61
Position : 1255929 - 1256840 bp
Length : 912 bp
Strand : +
Note : PFAM: Porphobilinogen deaminase, C-terminal domain; Porphobilinogen deaminase, dipyromethane cofactor binding domain; TIGRFAM: porphobilinogen deaminase

DNA sequence : 
ATGAAAAATATACGCATAGGAACTCGGGATAGTCAATTAGCAATGTGGCAAGCTGAGTGGGTTCAATCTCAACTAACTAA
GCTATATCCGGATCTCAATTTTGTGCTTGTCCCTATGAAAACTAAAGGGGATAAGATTTTAGATGTTCCACTTTCTAAGA
TCGGAGATAAGGGATTATTCACCAAGGAATTGGAACACGGTCTCTTAAATGACGAACTTGACATGGCTGTTCATAGTCTT
AAAGATATGCCAACCCAATTACCCCCAGGCCTAATCATTAGTGCTTTTTGTGAGAGGGAAGAACCCAGAGATGTTTTCTT
AAGCAAGAATGGAGTAAAACTCGAGGAGCTGCCTCCAGGGGCCCTGATTGGAACAAGTAGTTTGCGTCGGAAGTCTCAGC
TCAAACATTATCGGCCGGATCTAAATTTCACAGATTTAAGAGGTAATCTGCAAACCCGTTGGCGGAAGTTGCAAGAATCT
GACATGGTGGGTATTGTCCTGGCTGCTGCCGGTGTTAAACGACTGGGCTGGGCACATCGCATCACTCAGATCTTACCGGA
AGATATTATGTTGTCAGCAGTCGGTCAAGGATCTATCGCTATTGAAATCGATGAGAAACGTTCAGATGTTGCCGAACTGT
TAGCTCGTTTAAATCATCCGGAAACGGAAAGAGCAGTACGGGCCGAACGTACATTAATGCGCAAACTTGAAGGAGGCTGT
CAAGTTCCTATCGGAGCTTTGGGTCAAGTGGTTGATGGGGAGATAATCCTGCGAGGGATGGTGGCAAGTTTGGATGGCGT
CCGCGTACTTAAAGCAGAAGTAAGAGGTAGTGATCCCGAAAAAGTAGGTATTGAGGTTGCTAATCGTCTGATTGAGATGG
GAGCTGCTTCAATATTAGAGGAAATTCGATAG

Protein sequence : 
MKNIRIGTRDSQLAMWQAEWVQSQLTKLYPDLNFVLVPMKTKGDKILDVPLSKIGDKGLFTKELEHGLLNDELDMAVHSL
KDMPTQLPPGLIISAFCEREEPRDVFLSKNGVKLEELPPGALIGTSSLRRKSQLKHYRPDLNFTDLRGNLQTRWRKLQES
DMVGIVLAAAGVKRLGWAHRITQILPEDIMLSAVGQGSIAIEIDEKRSDVAELLARLNHPETERAVRAERTLMRKLEGGC
QVPIGALGQVVDGEIILRGMVASLDGVRVLKAEVRGSDPEKVGIEVANRLIEMGAASILEEIR

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
BJAB07104_00327 YP_008207792.1 Porphobilinogen deaminase Not tested AbaR25 Protein 9e-65 49
BJAB0868_00331 YP_008211657.1 Porphobilinogen deaminase Not tested AbaR26 Protein 9e-65 49