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Name : Desmer_0010 (Desmer_0010) Accession : YP_006619991.1 Strain : Desulfosporosinus meridiei DSM 13257 Genome accession: NC_018515 Putative virulence/resistance : Unknown Product : seryl-tRNA synthetase Function : - COG functional category : - COG ID : - EC number : 6.1.1.11 Position : 11271 - 12536 bp Length : 1266 bp Strand : + Note : PFAM: Seryl-tRNA synthetase N-terminal domain; tRNA synthetase class II core domain (G, H, P, S and T); TIGRFAM: seryl-tRNA synthetase DNA sequence : TTGTTAGATCTTAAGTATGTACGTAATAACCCTGAAGTGGTAAAAGAAGCTCTACAGAAGCGAAATGTCTCAATTAGTCT CGATCACTTCTTACAACAAGAAGAAGAAAGAAGAAAACTTTTATTTGAAGTTGAAACGTTGAAAGCTCGTCGTAATTCTG TTTCTGAAGAAGTTGGTCGTCTTAAGAAAAAGGGTGAAGATGCTGATGCCCTCGTATTAGAGATGCGAGAAGTAGGTCAA ACTATCAAAGAACTGGAAGAAAAATCAGCCGGCATTGTAGGAGAGATGGAAAAGGTTCTCTATGAGATTCCAAACATTCC CCATACTTCTGTGCCAATTGGTTCAGATGAGAGTGCCAATGTTCAAGTTCGCACTTGGGGAACCCCTCGAGAATTTGATT TTGAACCCAAGGCTCACTTTGAACTTGGTGAAAAGCTAGATGTTTTTGATTTTATTAGAGCAGCAAAAGTCACGGGTGCT CGCTTCACATTTTACAAAGGCTTGGGTGCAAAGTTAGAGAGATCCTTAATTTCTTTTATGCTTGATCGCCATACTTCAAA GGGTTATACAGAAATACTTCCTCCCTATATTGTTAATCGTGCTTCCATGACAGGAACCGGCCAATTGCCTAAATTTGAGG ATGACGCCTTTAAAGTTGTAGGAACGGACTATTTTCTAATTCCTACTGCAGAGGTTCCTGTGACAAATCTATATCGTGAT GAAATACTGGATGGTAGTCAATTTCCGATCCATCATTGTGCTTATAGTTCATGTTTTCGCTCAGAGGCCGGTTCAGCAGG AAGGGATACAAGAGGACTTATTAGGCAACACCAATTCAATAAGGTAGAACTAGTCAAATTCTCACTTCCGGAAAAATCTT ATGACGAACTTGAACTATTAACTAGGGATGCGGAAGGTATTCTTCAAGATTTGGAACTTCCTTATCGTGTCATGGCATTA TCCTCAGGAGATCTCGGTTTTTCTTCGGCGAAAACCTATGATTTAGAAGTTTGGTTGCCCAGCTTTAATACCTATAGAGA AATATCCTCTTGTAGCAATTTTGAAGATTTCCAAGCACGACGAGCTAATATTCGTTTTCGCAGAGGGCCTAAAGATAAAC CTGAGTTTGTTCATACCTTAAATGGTAGTGGATTAGCGATTGGAAGAACAGTGGCAGCTATTATGGAAAATTATCAAGAT AAAGACGGTAGAGTCCGTATTCCTAAAGTCTTACAACCCTATATGGGTGTTGAATATATTGGTTAA Protein sequence : MLDLKYVRNNPEVVKEALQKRNVSISLDHFLQQEEERRKLLFEVETLKARRNSVSEEVGRLKKKGEDADALVLEMREVGQ TIKELEEKSAGIVGEMEKVLYEIPNIPHTSVPIGSDESANVQVRTWGTPREFDFEPKAHFELGEKLDVFDFIRAAKVTGA RFTFYKGLGAKLERSLISFMLDRHTSKGYTEILPPYIVNRASMTGTGQLPKFEDDAFKVVGTDYFLIPTAEVPVTNLYRD EILDGSQFPIHHCAYSSCFRSEAGSAGRDTRGLIRQHQFNKVELVKFSLPEKSYDELELLTRDAEGILQDLELPYRVMAL SSGDLGFSSAKTYDLEVWLPSFNTYREISSCSNFEDFQARRANIRFRRGPKDKPEFVHTLNGSGLAIGRTVAAIMENYQD KDGRVRIPKVLQPYMGVEYIG |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| serS | YP_003446791.1 | seryl-tRNA synthetase | Not tested | The aminoglycoside resistance gene cluster | Protein | 2e-120 | 60 |
