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Name : GEM_3527 (GEM_3527) Accession : YP_006617612.1 Strain : Genome accession: NC_018514 Putative virulence/resistance : Unknown Product : lysine decarboxylase Function : - COG functional category : - COG ID : - EC number : 4.1.1.18 Position : 378698 - 381037 bp Length : 2340 bp Strand : - Note : - DNA sequence : ATGACCGCTTCCTTGACCCAACCGGCGTTCCGCCGCCTCGGCATGAAGGCGCTGCTCGTGCAGCACGACATCGACGAACG CACGGCCACCGGACGCGCAGCCACCGCGCTCGCCGAAGAGTTGCGCACGCGGCTCGTCGACGTCGTGATCGCGACGTCCG CCGAAGACGCACGCGCGGTAGTCGACGCCGATCCCGCGATCCAGTGCCTGCTGCTCAACTGGGAACTCGGCAACGCGCCC GATCATGCGCCCGCGCAGGCCGTGCTCGACGCGATGCGCGCGCGCAATGCGACGGTGCCGGTGTTCCTGCTCGCGAGCCG CGCGAGCGCGGCCGCGATTCCGGTCGACGCGATGCGCAAGGCCGACGACTTCATCTGGATGCTGGAGGACACCACCGCGT TCATCGGCGGCCGGATCGTCGCCGCGATCGAGCGCTACCGCGAGACCGTGCTGCCGCCGATGTTCCGCGCACTCGCACAG TTCTCGCGCGTGTACGAATACTCGTGGCACACGCCGGGCCACACGGGCGGCACCGCGTTCCTGAAATCGCCGGTCGGCCG TGCGTACTTCGAATTCTTCGGCGAGGCGCTGTTCCGCTCCGACCTGTCGATCTCGGTCGGCGAACTCGGCTCGCTGCTCG ACCACTCCGGCCCGATCGGCGAAAGCGAACGCTACGCGGCGCGCGTGTTCGGCGCGCACCGCACGTATCACGTGACGAAC GGCTCGTCGATGTCGAACCGCGTGATCCTGATGGCGAGCGTCACGCGCAACCAGGTCGCGCTGTGCGACCGCAACTGCCA CAAGTCGGCCGAGCACGCGATGACGATGTCCGGCGCGATTCCGACCTACCTGATCCCGTCGCGCAACCATTACGGGATCA TCGGGCCGATCATGCCGGAGCGGCTCACGGCCGCCGCGGTGCGCCTCGCGGTCGACGCGAACCCGCTGGTGCGCGGCCGC GCCGGCATCGATCCGACGCCGGTGCATGCGCTAATCACGAACTCGACGTACGACGGCCTCTGCTACAACGTCGCGCGCGT CGAGGAACTGCTCGGCCAGAGCGTCGACCGGCTGCATTTCGACGAAGCCTGGTACGGCTATGCGCGCTTCAACCCGATCT ACCGCGATCGCCACGCGATGCACGGCGATCCGTCGCAGCACGACGCGAGCAAGCCGACCGTGTTCGCGACGCAGTCGACC CACAAGCTGCTCGCCGCGCTGTCGCAGGCGTCGTTCATCCATGTCCGCGACGGCCGCAACCCGATCGAGCATGCGCGCTT CAACGAGGCGTACATGATGCATGCGTCGACCTCGCCGAACTACGCGATCATCGCGTCGAACGACGTGAGCGCCGCGATGA TGGACGGCCCCGGCGGCGAGGCGCTGACAACCGACGCGATCCGCGAGGCCGTGTCGTTCCGCCGGATGCTCGCGCGCCTG CATGCGGAATGCGAGGAAAACGACGACTGGTTTTTCAACGGCTGGCAGCCGGACACCGTCGTCGATCGCAAGACGGGCCG GCGCGTGCGCTTCCATGAAGCGGACGAGACGCTGCTGGTCAGCGATCCGTCATGCTGGGTGCTGCATCCGGGCGACACGT GGCACGGCTTCGGCGAGATCGAGGACGACTACTGCATGCTCGATCCGATCAAGGTGTCGATCGTCACGCCGGGCGTCGCG CCGCACGGCGGGCTGATGCCGGTCGGCATTCCGGCGACGGTCGTCACCGCGTACCTGGACCGGCACGGGATCGTCGTCGA GAAGACGACCGACTTCACGATCCTGTTCCTGTTCTCGCTCGGCGTGACGAAGGGCAAGTGGGGCACGCTCGTCAACACGC TGCTCGACTTCAAGCGCGACTACGATGCGAACGCACCGCTCGAACAGGCGCTGCCGGAACTCGTCGCACGCTATCCGGAC CGCTACGGCAAGCTCGGCCTGCGTGATCTGTGCGACCTGATGTTCAGCGCGATGAGCGACCTGAAGACGACCGAGATGAT GTCGCGCGGCTTCTCGACGCTGCCGCAGCCCGACTTCAGCCCGGCCGAGGCGTTCGAGCATCTCGTACACAACGACATCG AGATGCTGGAGCTGGCGGAGATGGAAGGCCGCACCGTCGCGACGGGCGTCGTGCCCTATCCGCCCGGCATTCCGCTGCTG ATGCCCGGCGAGAACGCGGGGCCGGCCGACGGGCCGCTGCTCGGCTACCTGAAGGCGCTCGAGCAGTACGACCTGCGCTT CCCCGGCTTCACGCACGATACGCACGGCGTCGAAGTCGAGGACGGCGTGTACCGGATCGCGTGCATCAAGGCAACCGTGC GCGACACCAACACGCGCTGA Protein sequence : MTASLTQPAFRRLGMKALLVQHDIDERTATGRAATALAEELRTRLVDVVIATSAEDARAVVDADPAIQCLLLNWELGNAP DHAPAQAVLDAMRARNATVPVFLLASRASAAAIPVDAMRKADDFIWMLEDTTAFIGGRIVAAIERYRETVLPPMFRALAQ FSRVYEYSWHTPGHTGGTAFLKSPVGRAYFEFFGEALFRSDLSISVGELGSLLDHSGPIGESERYAARVFGAHRTYHVTN GSSMSNRVILMASVTRNQVALCDRNCHKSAEHAMTMSGAIPTYLIPSRNHYGIIGPIMPERLTAAAVRLAVDANPLVRGR AGIDPTPVHALITNSTYDGLCYNVARVEELLGQSVDRLHFDEAWYGYARFNPIYRDRHAMHGDPSQHDASKPTVFATQST HKLLAALSQASFIHVRDGRNPIEHARFNEAYMMHASTSPNYAIIASNDVSAAMMDGPGGEALTTDAIREAVSFRRMLARL HAECEENDDWFFNGWQPDTVVDRKTGRRVRFHEADETLLVSDPSCWVLHPGDTWHGFGEIEDDYCMLDPIKVSIVTPGVA PHGGLMPVGIPATVVTAYLDRHGIVVEKTTDFTILFLFSLGVTKGKWGTLVNTLLDFKRDYDANAPLEQALPELVARYPD RYGKLGLRDLCDLMFSAMSDLKTTEMMSRGFSTLPQPDFSPAEAFEHLVHNDIEMLELAEMEGRTVATGVVPYPPGIPLL MPGENAGPADGPLLGYLKALEQYDLRFPGFTHDTHGVEVEDGVYRIACIKATVRDTNTR |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| cadA | NP_756988.1 | lysine decarboxylase, inducible | Not tested | PAI II CFT073 | Protein | 5e-123 | 41 |
