Gene Information

Name : GEM_3516 (GEM_3516)
Accession : YP_006617601.1
Strain :
Genome accession: NC_018514
Putative virulence/resistance : Virulence
Product : two component transcriptional regulator
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 370096 - 370854 bp
Length : 759 bp
Strand : -
Note : -

DNA sequence : 
ATGCGCGGCCGACCGCCGTTCTTTAAGCTCGCCCTAAGACACCTGCGCTTATCATGGGAACCCCGGGCGCTCGTGCCCAC
CACCAGACACCAATCCATGCGCGTACTGCTCGTCGAGGACGATCCGCTGATCGGCAGCGGGCTCGAACAGGGCCTAAAAC
AGGAAGGCTTCGCGGTCGACTGGGTGAAGGACGGCGACGCCGCGTCGCTCGCGCTGCGCTCGACCAGCTACGGCCTGCTG
CTGCTCGACCTCGGGCTGCCGAACCGCGACGGCCTGTCGGTGCTCGCGTCGCTGCGCCGCCGCGACGAGACCCTGCCCGC
GATCATCATCACCGCGCGCGACGGCGTGCCGGACCGCATCGCCGGCCTCGACAGCGGCGCCGACGATTACCTCGTCAAAC
CGTTCGTGCTCGAGGAACTGCTCGCCCGCATTCGCGCGGTCAACCGCCGCCATGCGGGGCGCGCGCAAACGACGCTCGCG
ATCGGCCCGCTGCGGCTCGATCCCGTCAAGCACGTGGTCTGGCTGAACGACGACGAAGTCACGCTGTCGCCGAAGGAATT
CGTGCTGCTGCACGAACTGATGCGCGACCCCGGCGCGGTGATTTCGCGCGAACAGTTCGAGGAACGGCTGTACAGTTGGG
GCGAGGAAATCGAAAGCAACGCGGTGCAGGTGCATATCCACAACCTGCGCAAGAAGCTCGGCCACGACATGATCCGTACG
GTGCGCGGCGTCGGCTACCGGATCGGTGACGGCGCATGA

Protein sequence : 
MRGRPPFFKLALRHLRLSWEPRALVPTTRHQSMRVLLVEDDPLIGSGLEQGLKQEGFAVDWVKDGDAASLALRSTSYGLL
LLDLGLPNRDGLSVLASLRRRDETLPAIIITARDGVPDRIAGLDSGADDYLVKPFVLEELLARIRAVNRRHAGRAQTTLA
IGPLRLDPVKHVVWLNDDEVTLSPKEFVLLHELMRDPGAVISREQFEERLYSWGEEIESNAVQVHIHNLRKKLGHDMIRT
VRGVGYRIGDGA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
armR AAN62112.1 putative response-regulator ArmR Not tested PAGI-2(C) Protein 7e-37 49

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
GEM_3516 YP_006617601.1 two component transcriptional regulator BAC0487 Protein 7e-32 45
GEM_3516 YP_006617601.1 two component transcriptional regulator BAC0197 Protein 3e-27 42
GEM_3516 YP_006617601.1 two component transcriptional regulator NC_010079.5776364.p0 Protein 1e-22 41
GEM_3516 YP_006617601.1 two component transcriptional regulator NC_002952.2859858.p0 Protein 1e-22 41
GEM_3516 YP_006617601.1 two component transcriptional regulator NC_007622.3794948.p0 Protein 1e-22 41
GEM_3516 YP_006617601.1 two component transcriptional regulator NC_003923.1003417.p0 Protein 1e-22 41
GEM_3516 YP_006617601.1 two component transcriptional regulator NC_013450.8614146.p0 Protein 1e-22 41
GEM_3516 YP_006617601.1 two component transcriptional regulator NC_002951.3238224.p0 Protein 1e-22 41
GEM_3516 YP_006617601.1 two component transcriptional regulator NC_007793.3914065.p0 Protein 1e-22 41
GEM_3516 YP_006617601.1 two component transcriptional regulator NC_002758.1121390.p0 Protein 1e-22 41
GEM_3516 YP_006617601.1 two component transcriptional regulator AE015929.1.gene1106. Protein 1e-18 41
GEM_3516 YP_006617601.1 two component transcriptional regulator BAC0083 Protein 2e-28 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
GEM_3516 YP_006617601.1 two component transcriptional regulator VFG0473 Protein 8e-40 50
GEM_3516 YP_006617601.1 two component transcriptional regulator VFG1389 Protein 3e-26 41