Gene Information

Name : GEM_5831 (GEM_5831)
Accession : YP_006619909.1
Strain :
Genome accession: NC_018514
Putative virulence/resistance : Unknown
Product : ISAfe4, transposase
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 2917041 - 2918627 bp
Length : 1587 bp
Strand : +
Note : -

DNA sequence :
ATGCCCGATCATGCGCCGCTTCCGGACACCATTGCCGAGCTCCACGCCCTGGTGCTCGAACAGCAGGCATCGATCGCTAA
GATGCGCCAGGAGATCGCCGAACGCGACCGGGAGATTGTTGAACGGGACCAGGAGCTCGAGCGCCTGAAGGCGCAAATCG
ACAAGCTCAGGCGCATGCACTTCGGTCGCAAATCCGAGCAAGTAGACCGGCAGATCGATCGGCTCGAAACCCAACTTGAG
GATCTGGCAGCGGGTAGCGGCGTTGCCGATGTTCGCCGTGCACGCGCTCGTGCATCGAGCTCAGGCGCGTCTGCGGCATC
CGCGAAGGAAGCCTTGGCGCCCCATCTGCCACGCGAAGAGCGCGAGCTCGAGCCCGATTCCATCTGCCCGAAGTGCAACA
ACGCCATGGAGTTGCTCGGCGAGGATGTGTCTGAGCAGCTCGCGCGCGTCACGGCGATGTTCAAGGTCATCCGCACGATC
CGTCGCAAGCGGATCTGCGCCGGTTGCGGCCATATCGCGCAACCTCCCATGCCGGGGCTGCCGATCGAGCGCAGCATCGC
GCATCCGAGCTTGCTGGCCGAGATCATCGTTGCCAAGTATGCAAATCACACGCCGCTGTATCGGCAATCCGAGATCGCGG
CTCGCGATGGCGTACGTCTCGATCGGGCCACCATGGCACGCTGGGTCGGGCAATGCGAAGAACTCTGTCGGCTGCTGACT
GAAGCCCTGCGGCGCTACACCATGGCGACTGCGAAGCTCCACGCGGACGACACACCGATCCCGGTGCTCGCGCCCGGCAA
CAAGAAAACCAAAACTGGTCGGTTGTGGGTCTACGTGCGCGATGATCGACGCTCAGGTTCGCGCGACCCCGCTGCTGTCT
GGTTCGCGTACTCGCCGGACCGCAAAGGCATCCATCCTCAGACCCATCTTGCCGGATTCAAAGGCGTCCTTCAGGGGGAC
GGCTATGCCGGCTTCAACGAGTTGACCGAAAGCGGCAAAGTTCGTCTGGCATTTTGCTGGGATCATGCGCGCCGATACGT
ATTCAACGTGCATGAGACAGCCCCGTCGGAAACCACGAAGCAATGGCTCGACATGATTGGCGAGTTCTACGGAATCGAGG
CTGATATCCGCGGCAAACCACCCGACGAGCGGCGACGCGTCAGGCAGGAAAAGAGCAGCCCGTTGCTCGCGGCCCTCGAG
ACGTCGATGAGGGAGAAACTCGCGACTCTTTGGCCGAAGGCACCCCTGGTCGAAGCGATCAACTACTCTCTGAACCGCTG
GGACGGCCTCACAATGTTCTGTGACGACGGCCGCGTCGAGATCAGCAACGTGCTCGCAGAAAATGCTTTGCGCTGCGTGG
CCCTCGGCCGACGCAATTTCATGTTCGCTGGCTCTGACAGCGGTGGCGAGCGAGCCGCCGCAATGTATAGCTTGATCGGC
TCGTGCAAGTTGAATGGCATCAACCCACGCGCCTACCTGGAATATGTACTTACGCACATTGCCGATCACCAGGCCAACCG
CATCGACGAACTGTTGCCCTGGAACGTCGCGAAGCACCTGCTTCCATCTACACCTTCATCGGGTTGA

Protein sequence :
MPDHAPLPDTIAELHALVLEQQASIAKMRQEIAERDREIVERDQELERLKAQIDKLRRMHFGRKSEQVDRQIDRLETQLE
DLAAGSGVADVRRARARASSSGASAASAKEALAPHLPREERELEPDSICPKCNNAMELLGEDVSEQLARVTAMFKVIRTI
RRKRICAGCGHIAQPPMPGLPIERSIAHPSLLAEIIVAKYANHTPLYRQSEIAARDGVRLDRATMARWVGQCEELCRLLT
EALRRYTMATAKLHADDTPIPVLAPGNKKTKTGRLWVYVRDDRRSGSRDPAAVWFAYSPDRKGIHPQTHLAGFKGVLQGD
GYAGFNELTESGKVRLAFCWDHARRYVFNVHETAPSETTKQWLDMIGEFYGIEADIRGKPPDERRRVRQEKSSPLLAALE
TSMREKLATLWPKAPLVEAINYSLNRWDGLTMFCDDGRVEISNVLAENALRCVALGRRNFMFAGSDSGGERAAAMYSLIG
SCKLNGINPRAYLEYVLTHIADHQANRIDELLPWNVAKHLLPSTPSSG

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
BCAM0248 YP_002232880.1 putative transposase Not tested BcenGI11 Protein 7e-121 54
st57 CAC81895.1 ST57 protein Not tested LEE II Protein 5e-111 53
Z1131 NP_286666.1 hypothetical protein Not tested TAI Protein 1e-117 52
unnamed CAC39285.1 hypothetical protein Not tested LPA Protein 2e-118 52
Z1570 NP_287074.1 hypothetical protein Not tested TAI Protein 1e-117 52
unnamed AAC31494.1 L0015 Not tested LEE Protein 2e-118 52
Z4337 NP_289562.1 hypothetical protein Not tested OI-122 Protein 2e-118 52
Z5098 NP_290249.1 prophage-associated protein Not tested LEE Protein 2e-118 52
ECs4547 NP_312574.1 hypothetical protein Not tested LEE Protein 9e-119 52
tnp AEA34686.1 transposase Not tested Not named Protein 8e-119 52
unnamed ACU09439.1 IS66 family element transposase Not tested LEE Protein 7e-119 52
unnamed AAL57570.1 unknown Not tested LEE Protein 1e-118 52
unnamed CAI43806.1 hypothetical protein Not tested LEE Protein 2e-119 52
Z4340 NP_289564.1 hypothetical protein Not tested OI-122 Protein 2e-98 52
unnamed AAL08460.1 unknown Not tested SRL Protein 3e-86 50
Z1600 NP_287104.1 hypothetical protein Not tested TAI Protein 2e-105 48
Z1161 NP_286696.1 hypothetical protein Not tested TAI Protein 2e-105 48
ECO103_3554 YP_003223421.1 hypothetical protein Not tested LEE Protein 1e-93 46
Z4317 NP_289543.1 hypothetical protein Not tested OI-122 Protein 5e-94 46
aec53 AAW51736.1 Aec53 Not tested AGI-3 Protein 8e-106 45

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
GEM_5831 YP_006619909.1 ISAfe4, transposase VFG0793 Protein 1e-118 52
GEM_5831 YP_006619909.1 ISAfe4, transposase VFG1051 Protein 2e-86 50
GEM_5831 YP_006619909.1 ISAfe4, transposase VFG1736 Protein 2e-81 47