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Name : GEM_5705 (GEM_5705) Accession : YP_006619783.1 Strain : Genome accession: NC_018514 Putative virulence/resistance : Unknown Product : sigma-54 dependent transcription regulator Function : - COG functional category : - COG ID : - EC number : 3.6.1.15 Position : 2780318 - 2782312 bp Length : 1995 bp Strand : - Note : - DNA sequence : ATGGACCTCTCCTCGACCAAGCCCGTCGGCCCGGCCGACCGCGCGGTGCGCCCGCGCATCTGGGCGATGGGCATCAGCCG CCTGCGCGACCTGTTTCGCGAGATCGCCGGCGAATTCGACGAACGCGCCGACGTGCGCATCGTCACGCGCGCTTACGAAG ACGCGCTGAGCGCGATCGCGGAGGCCGGCACCGCGCGGCCCGACGTGATCGTCGCGGCCGGCTCGAACGGCGGCTTCCTG AAAACACGCGCGCAGGTACCGGTCGTAGTCGTGTCGCCGACCGGCTTCGACGTGATGCAGGCACTCGCGCGCGCACGGCG CGACGCGTCGCGGATCGCGCTCGTCAGCGCCGGCGAGACGCCACCGGAAGTGCGCCGCTTCGTCGCCGCCTACGGTCTCG ACGTGCAGTTTGCGTCATATCAGTCCGCGCAGGAAGCGGAAGCCTGCGTGCACGACCTGCACGATCGCGGCATCGAGACG ATCGTCGGCCCCGGCCTCGTCACCGATCTCGCGGCGAGCGCCGGCATGGGCGCGGTGTTCCTGTATTCGCACGCGTCGGT GCGCAAGGCTGTCGAGACGGCGCTCGAAGTCGCGTACGCGACGCACGCCGAGGCGTTTCGCCGCCAGCGGCTCGACAACC TGCTGCAGCACCTGCGCGACGGCGTGGTTGCACTCGACGCGCGCGGCCGCGTCGAGGCCATCAACGAGCGGCTCGCATCG GCGCTCGGGGTCGAACCCGCTGCGGCCGTCGGCCGCGCGCTCGTCGACCTGCGGCCCGAGCTGCGCACGCTGCGCGGCGA GGACGGCGACGCGCTCGCGACCGTGCGCGGCGTGCGCTACGTCGTGCATCGCGGGCCGCTCGTCGATCGCGGCGTCACGT CGGGCAGCGTGCTGACGTTCCAGGAATCGCGCGCGGTCGAACGGCTCGACCGTGCGCTGCGCTCGCAGCCGAACACACAG CAGTTCGCCGCGCGCTACACGCTCGACGACGTGATCGGCGCGTCCGCGCCGATGGCGCGCGCGCGCGATCTCGTGCGCCG CTACGCGAAATCCGACGCGACCGTGCTCGTGCTCGGCGAAAGCGGCACCGGCAAGGAAATGATCGCGCAGAGCCTGCATG CGCTGTCCGTGCGGCGCAGCTATCCGTTCGTCGCGATCAACTGCGGCGCGTTTCCGGAAGCGCTGCTCGAGAGCGAGCTG TTCGGCTACGAGGAAGGCGCGTTCACCGGCGCGCGGCGCGGCGGCAAGACCGGGCTGTTCGAGGCCGCGCACCGCGGCAC GCTGTTTCTCGACGAGATCGGCGAGATGCCGCCGTCGCTGCAAAGCCGGCTGCTGCGCGTGTTGCAGGAGCGCGAGGTGA TCCGCCTCGGCTCGACCGAGCCGATCCGCATCGACGTGCGCGTGATCGCCGCGACGCATCGTCCGCTGCTCGCGGCCGTG GAGGCCGGCACGTTCCGCGCCGATCTCTATTACCGGCTCAACATCCTGAACGTCGGCCTGCCGCCGCTGCGCGAGCGCGC CGCCGACATTCCGGCGCTCGCGGCCACGCTGCTCGTGCAGGCCGCGCGGCGCGAGCCGCGGCTGGCCGAACGCGTGCGCG AGGTCAGCGATGCCATGCGCGTGCTCGACGCGACGCAGGCGACGCTCGCGCGCTACCGGTGGCCCGGCAACGTGCGGGAA CTGCAGAACGTGGTCGAGCGGATCGCGGTGGAACTGGCCGAGGAAGTCGACGAGAACGATCCGGGCGCCGCGTGCGCGGC GCTCGCGCCCGATGCGCTGCAGGCGATCGCGCCCGAGTTGTTCGCGGCGCCGCCCGACGCGGCCGATACCGATACCGATG CCGACGACGCACGGACGCTCCAGGCGCGCCGCCGCCGCGCGGAAGCCGACGAGATCCGCGCGGTGCTCGACGCGTGCGGC GGCGACCGCGATCGCGCGTGCGCGATGCTCGGCATCAGCAAGACGACGCTGTGGCGGAAGATGTCGGCGAAATAG Protein sequence : MDLSSTKPVGPADRAVRPRIWAMGISRLRDLFREIAGEFDERADVRIVTRAYEDALSAIAEAGTARPDVIVAAGSNGGFL KTRAQVPVVVVSPTGFDVMQALARARRDASRIALVSAGETPPEVRRFVAAYGLDVQFASYQSAQEAEACVHDLHDRGIET IVGPGLVTDLAASAGMGAVFLYSHASVRKAVETALEVAYATHAEAFRRQRLDNLLQHLRDGVVALDARGRVEAINERLAS ALGVEPAAAVGRALVDLRPELRTLRGEDGDALATVRGVRYVVHRGPLVDRGVTSGSVLTFQESRAVERLDRALRSQPNTQ QFAARYTLDDVIGASAPMARARDLVRRYAKSDATVLVLGESGTGKEMIAQSLHALSVRRSYPFVAINCGAFPEALLESEL FGYEEGAFTGARRGGKTGLFEAAHRGTLFLDEIGEMPPSLQSRLLRVLQEREVIRLGSTEPIRIDVRVIAATHRPLLAAV EAGTFRADLYYRLNILNVGLPPLRERAADIPALAATLLVQAARREPRLAERVREVSDAMRVLDATQATLARYRWPGNVRE LQNVVERIAVELAEEVDENDPGAACAALAPDALQAIAPELFAAPPDAADTDTDADDARTLQARRRRAEADEIRAVLDACG GDRDRACAMLGISKTTLWRKMSAK |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| unnamed | AAK01495.1 | propionate catabolism operon regulator prpR | Not tested | PAGI-1 | Protein | 2e-98 | 41 |
