Gene Information

Name : GEM_5464 (GEM_5464)
Accession : YP_006619542.1
Strain :
Genome accession: NC_018514
Putative virulence/resistance : Unknown
Product : RND efflux transporter
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 2523672 - 2526032 bp
Length : 2361 bp
Strand : -
Note : -

DNA sequence :
GTGCTCAATCGTCTGGTCAGCCGCCTCGAGAGGCTCTTCTTCGGTCATCGCGCACTCGTGCTCGCGGCGATCGCGTTGTT
CACCGTCGCGATGGCCGTGTGCGCCGTACAGCTGCGCATGGATGCCGGCTTCGAAAAGCAGATGCCGATCGGGCACGAGT
ACATCCGCACGTTCCAGCAATATCGCAACGACCTGCTCGGCGCGAACCGGATCACGGTGGTGGTGCGGGCGAAGCACGGG
TCGATCTGGTCGAAGGAAGGGCTCACGCGGCTGTACAACGTCACGCAGGCCGTCACGTATCTGCCGAACGTCGACCGCAT
CGGCGTGCGCTCGCTGTGGACGCCGAACGCGTTCGTCAACGAAGTGACCGACGAAGGCTTTCGCGCGGAGCCGATCATTT
CCGGCACGATCACCCCCGACCAGCTGACACCGGATATCGTCGCCCGCGTGCGCCGTGCAACGACGCTCGGCGGCTATGTC
GGCACGCTCGTGTCGCATAACGAAGACAGCGCGATGATCACGGCCGAGCTGAACGAGCGCGACAGCGCCGGCAAGGTGCT
CGACTACGTCGCGTTCAACCACCTGCTCGAACAGAAGATCCGCAAGCCGTTCGAGGACGCCGGCTACGAGATCCAGGTCA
TCGGCTTCGCGAAGCAGATCGGCGACATCGCCGACGGCGCGACGGCCGTGCTCGGCTTCTGCGCGGTCGCGCTGCTGCTG
ACCACGATCGCCGTGTACTGGTATTGCCATTCGGTGCGCTTCACGGTGCTGCTGATCGCGTGTTCGCTGACGTCACTCGT
ATGGCAGTTCGGCACGCTGACGCTGCTCGGCTTCGGCCTCGATCCGCTCGCGGTGCTGGTGCCGTTCCTCGTGTTCGCGA
TCGGCGTGTCGCACGGCGTGCAGCAGGTGAACTTCATCGTGCGGGAGATCGCGCACGGGCAGAGCTCGTACGACGCCGCA
CGCCACAGTTTCCGCGGGCTGTTGATCCCCGGTGTGCTCGCGCTGATCACCGCGTTCGTGTCGTTCATCACGCTGCTGCT
GATTCCGATCCCGATGGTGCGCGAGCTGGCGATCACCGCGTCGCTCGGCGTCGCGTACAAGATCGTCACGAACCTGATCC
TGCTGCCGGTGGCCGCCTCCTGCTTCAAATTCACGAAAGCCTATGCGGACAACTCGCTGAAGCGCGCGCAGCAGCGCGCG
AAGCCGCTGCGCGTGCTCGCGCGGGTGGCCGAGCCGAAGTACGCGGGGCTCACCGTGGCGCTGACGGTCGCGATCTTCGC
GCTCGCCGCATGGCAAAGCCGCGATCGCGTGATCGGCACGCTGCAGCCGGGCGCGCCGGAGCTGCGCGCCGATGCGCGCT
TCAACCGCGATGCGACGTCGATCGCCGGCAACTACGACATGGGCCTCGACTGGCTCACGGTCGCGCTCGAATCGAGCGGC
AAGGCCTGCGACAACCCGGCGGTCGGCCTGTACCAGGACGACTTCTCGGCCGCGATGCGCACCGAGCCGGGCGTGGTGTC
GGTGCAGTCGTATTCGTCGATGCTGCGCACCTACAACCAGGGCTACAACGAGGATTACCCGAAGATGAACGTCGTGCCGA
TCGATGCCGAAAACTACGGCGCGGTGTCGGTGGACGTGTCGCGCGTGAAGGGTTTCATGAGCCGCGATTGCAGGATGACG
GCCGTACACCTGTTCCTGACCGACCACAAGGCGACCACGATCAACCGGATCCTCGACGACGTGAAGCAATACCGCGCGGC
GCATCCGTTCCCGGGCATCACGGTCCGGCTCGCGGCCGGCAACGCGGGCGTGCTGGCCGCCACGAACGACGAGGTCGCGA
AGAGCGAGCTGCCGATGATGCTCTACGTGTACGCGGCGATCCTGATCCTCGTATTCCTCGCGTATCGCGACTGGCGCGCG
ATGCTCGCATGCTGCGTGCCGCTGTCGGTTGCGACCTTCATCGGCTACGGGTTCATGAAGGCGCTGCAGATCGGCCTGAC
CGTCGCAACGTTGCCGGTTATGGTGCTGGCGGTCGGGATCGGCGTCGACTACGCGTTCTATATCTACAACCGGCTGCAGG
TGCATCTCGCGGGCGGACAGGACATCGTGACGGCCGTGCAGCACGCGATGCTCGAAGTGGGCGTCGCGACGATCTTCACA
GCGATCACGCTGGCGATCGGCGTCGCGACGTGGAGCTTCTCCGCACTCAAGTTCCAGGCCGACATGGGCAAGCTGCTCGC
GTTCATGTTCATCGTGAACCTCGTGATGGCGATGACCGCGCTGCCCGCGCTCGCGTCGCTGCTCGAACGCTGGTTCCCGC
GCCGCAAGCCTGCTCGTGCCCCGGGCCTGTTCAGCCATTGA

Protein sequence :
MLNRLVSRLERLFFGHRALVLAAIALFTVAMAVCAVQLRMDAGFEKQMPIGHEYIRTFQQYRNDLLGANRITVVVRAKHG
SIWSKEGLTRLYNVTQAVTYLPNVDRIGVRSLWTPNAFVNEVTDEGFRAEPIISGTITPDQLTPDIVARVRRATTLGGYV
GTLVSHNEDSAMITAELNERDSAGKVLDYVAFNHLLEQKIRKPFEDAGYEIQVIGFAKQIGDIADGATAVLGFCAVALLL
TTIAVYWYCHSVRFTVLLIACSLTSLVWQFGTLTLLGFGLDPLAVLVPFLVFAIGVSHGVQQVNFIVREIAHGQSSYDAA
RHSFRGLLIPGVLALITAFVSFITLLLIPIPMVRELAITASLGVAYKIVTNLILLPVAASCFKFTKAYADNSLKRAQQRA
KPLRVLARVAEPKYAGLTVALTVAIFALAAWQSRDRVIGTLQPGAPELRADARFNRDATSIAGNYDMGLDWLTVALESSG
KACDNPAVGLYQDDFSAAMRTEPGVVSVQSYSSMLRTYNQGYNEDYPKMNVVPIDAENYGAVSVDVSRVKGFMSRDCRMT
AVHLFLTDHKATTINRILDDVKQYRAAHPFPGITVRLAAGNAGVLAATNDEVAKSELPMMLYVYAAILILVFLAYRDWRA
MLACCVPLSVATFIGYGFMKALQIGLTVATLPVMVLAVGIGVDYAFYIYNRLQVHLAGGQDIVTAVQHAMLEVGVATIFT
AITLAIGVATWSFSALKFQADMGKLLAFMFIVNLVMAMTALPALASLLERWFPRRKPARAPGLFSH

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed AAK01517.1 transport protein Not tested PAGI-1 Protein 0.0 67