Gene Information

Name : GEM_5254 (GEM_5254)
Accession : YP_006619333.1
Strain :
Genome accession: NC_018514
Putative virulence/resistance : Virulence
Product : aldehyde dehydrogenase
Function : -
COG functional category : -
COG ID : -
EC number : 1.2.99.3
Position : 2300410 - 2301876 bp
Length : 1467 bp
Strand : -
Note : -

DNA sequence :
ATGCAAACCCAACTCTTCATCGACGGGCGCTTCGTTGACGCCGTCGACCGCGGCACGATCGACGTGCTCAATCCGCACGA
CGGCTCGCTGATCACCAAAATTGCCGCCGCCACCGCGGCGGATGTGGATCTCGCCGTCGAAGCCGCCGCCCGCGCGTTCC
CGACATGGTCGGCCATGCCGGCGGCCGAGCGCGGCCGGCTGCTGCTGCGCCTCGCCGATGCCATCGAGGCCAACGCGGAG
GAACTCGCGCAGCTCGAATCGCTGGACACCGGTCACCCGATCCGCGATTCGCGTGCGCTCGACGTGCCGCGCACGGCAGG
CTGCTTCCGCTACTTCGGCGGCATGGCCGACAAGCTGCAGGGCTCGGTGATTCCCGTCGAAACCGGCTTCCTGAACTATG
TGCAGCGCGCGCCGATCGGCGTCGTCGGCCAGATCGTGCCGTGGAATTTCCCGCTGATGTTCACGAGCTGGAAGATGGGC
CCGGCGCTGGCCGCGGGCAACACGGTCGTGCTCAAGCCGTCGGAAATCACGCCGCTGTCGACGTTGCGCATCGTCGAGCT
GATGGCCGAGGTCGGGTTCCCGGCGGGTGTCGTCAATATCGTCCCCGGTTACGGGCATACGGCCGGCCAGCGGCTCGCCG
AACACCCCGGCGTCGGCAAGATCGCGTTCACGGGTTCGACGGCGACGGGCCGCCGGATCGTCGAGGCCTCGCAGGGCAAC
CTGAAGCGCGTGCAGCTGGAACTGGGCGGCAAGGGCGCGAACATCGTCTTCGACGATGCGAACCTCGATGCGGCCATCAA
CGGTGCCGCATGGGCGATCTTTCACAACCAGGGGCAGGCGTGCATCGCGGGTTCGCGTCTCGTGCTGCACGAACGCATCG
CGGATGAGTTCCTCGAGCGCTTCGTGTCGCTGGCTTCGTCGATTCGCGTCGGCAATCCGCTGGACCCGGACACCGAGATG
GGCCCGCTGACGTCGAAGCAGCACCTCGATCGCGTGCTGTCGTTCGTCGACGTCGCGCGCGAGCAGGGTGGCCGCGTGCT
CGCGGGCGGCAGCGCGCCGCAGGAGCCGGCGCTGGCCAACGGCTACTACGTGCGCCCGACCATCATCGAGGCGAAGAGCG
CGGCCGACCGGGTTGCGCAGGAGGAAGTGTTCGGGCCGTTCGTCACCGTGCTGCGCTTCAGCAGCGACGAGGAAGCGCTG
GCGATCGCCAACGCGACCGAATACGGGCTCGGCAGCGGCCTTTGGACCAACGACCTGTCCCGCGCGCACAGGATGGCGTC
CAAAATCGACGCAGGCATGTGCTGGATCAACTGCTACAAGCGCGTCAATCCGGGCAGCCCGTTCGGCGGCATCGGGAAGT
CGGGCTACGGCCGCGAGATGGGTTTCGAGGCGATGCACGACTACACGGAAGCGCGCTCGGTGTGGGTCAACGTCGACGGC
AAGGTGCCGCCGCATTTCAAGCGCTGA

Protein sequence :
MQTQLFIDGRFVDAVDRGTIDVLNPHDGSLITKIAAATAADVDLAVEAAARAFPTWSAMPAAERGRLLLRLADAIEANAE
ELAQLESLDTGHPIRDSRALDVPRTAGCFRYFGGMADKLQGSVIPVETGFLNYVQRAPIGVVGQIVPWNFPLMFTSWKMG
PALAAGNTVVLKPSEITPLSTLRIVELMAEVGFPAGVVNIVPGYGHTAGQRLAEHPGVGKIAFTGSTATGRRIVEASQGN
LKRVQLELGGKGANIVFDDANLDAAINGAAWAIFHNQGQACIAGSRLVLHERIADEFLERFVSLASSIRVGNPLDPDTEM
GPLTSKQHLDRVLSFVDVAREQGGRVLAGGSAPQEPALANGYYVRPTIIEAKSAADRVAQEEVFGPFVTVLRFSSDEEAL
AIANATEYGLGSGLWTNDLSRAHRMASKIDAGMCWINCYKRVNPGSPFGGIGKSGYGREMGFEAMHDYTEARSVWVNVDG
KVPPHFKR

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed AAK01506.1 putative aldehyde dehydrogenase Not tested PAGI-1 Protein 6e-81 43
ORF SG19 AAN62241.1 putative aldehyde dehydrogenase Not tested PAGI-3(SG) Protein 3e-85 43
VC0819 NP_230467.2 aldehyde dehydrogenase Not tested VPI-1 Protein 1e-79 43
aldA AAC12273.1 aldehyde dehydrogenase Virulence VPI Protein 2e-79 43
aldA AAK20747.1 aldehyde dehydrogenase Virulence VPI Protein 2e-79 43
aldA AAK20776.1 aldehyde dehydrogenase Virulence VPI Protein 2e-79 43
aldA-1 YP_001216300.1 aldehyde dehydrogenase Not tested VPI-1 Protein 2e-79 43

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
GEM_5254 YP_006619333.1 aldehyde dehydrogenase VFG0082 Protein 6e-80 43