Gene Information

Name : GEM_5083 (GEM_5083)
Accession : YP_006619163.1
Strain :
Genome accession: NC_018514
Putative virulence/resistance : Virulence
Product : NAD-dependent aldehyde dehydrogenase
Function : -
COG functional category : -
COG ID : -
EC number : 1.2.1.3
Position : 2121245 - 2122738 bp
Length : 1494 bp
Strand : +
Note : -

DNA sequence :
ATGCAGGCAACGTTGTCGTTACTTCCGCAAACCCAGTCGTTCATCGCGCGCACGCCGTCGATGCTGATCGGCGATGCGTG
GCGCAGCGCCGAAAGCGGCGCCACCCTGGCAGTCCACAATCCCGCGACCGGCGACGAACTGTGCCGCGTGCCGGCGTCCG
GCGCGGCCGACGTCGACCACGCGGTACGCGCGGCCCGGCAGGCGTTCGACGATTCCGCGTGGAGCCGCATGCGGCCGCGC
GAACGGCAGAACCTGCTGTGGCGTCTTGCGGATCTGCTCGAACGCGACGCGCAGCAGCTCGCCGAGCTCGAATGCGTGAA
CAACGGCAAGAGCGCACAGATCGCGCGCGTGATGGACGTGCAGCTGTCGATCGACTTCCTGCGCTACATGGCCGGCTGGG
CGACCAAGATCGAAGGCGCGACCGTCGACGTGTCGATGCCGCTGATGCCCGACAGCCAGTTCCACGGCTTCATCCGGCGC
GAGGCCGTCGGCGTGGTCGGCGCGATCGTCGCGTGGAACTTCCCGCTGCTGCTCGCGTGCTGGAAGCTCGGCCCCGCGCT
TGCGACGGGCTGCACGATGGTGCTGAAGCCCGCCGACGAAACGCCGCTCACCGCGCTGCGGCTCGCGGAACTCGTGCAGG
AAGCCGGCTATCCGACCGGCGTGTTCAACGTCGTCACCGGCACCGGCGCGGAAGCGGGCGCCGCGCTCGCACACCACCCG
GACGTCGACAAGCTGACCTTCACGGGCTCGACCGAAGTCGGCAAGCTGATCGGCAAGGCCGCGATGGAATCGATGACGCG
CGTGACGCTCGAACTCGGCGGCAAGTCGCCGACGATCGTGTTCGACGATGCGGACCCCGCCGTTGCGGCGTCCGGCGCGG
CCACCGCGATCTTCTTCAATCACGGCCAGGTGTGCTGCGCCGGCTCGCGCCTGTACGTGCAGCGCAAGCACTTCGATCGC
GTGGTGGGCGACATCGCCGGCATCGCGAGCAACATGAAGCTCGGCAACGCGCTCGACCCGTCGGTCGACATGGGGCCGCT
GATCTCGGCGAAGCAGCAAAAGCGCGTGGCCGGCTACATCGAGCGCGGCCGCGAACTGGGCGCGCAGCTCGCGTGCGGCG
GCGAAGCGTACGGCCCCGGCTACTTCGTGAAGCCGACCGTGCTCGTCGACGTCGACCAGAAGGGCCCGCTCGTGCAGGAG
GAGATCTTCGGGCCGGTGCTGGTCGCGATGCCGTTCGACACGATCGACGACGCGATCCGCCTCGCGAACGATACGCGCTA
CGGGCTCGGCGCGAGCATCTGGACCAACAACCTGTCGGCCGCGCACCGGATGATCCCGAAGATCCGCTCGGGTTCGGTCT
GGGTCAATTGCCACAGCGCGCTCGATCCCGCGCTGCCGTTCGGCGGCTACCGGATGTCGGGCTTCGGCCGCGAGATGGGC
GCGGCCGCGATCGAGCACTACACGGAACTGAAATCGGTGCTGATGAACGTGTGA

Protein sequence :
MQATLSLLPQTQSFIARTPSMLIGDAWRSAESGATLAVHNPATGDELCRVPASGAADVDHAVRAARQAFDDSAWSRMRPR
ERQNLLWRLADLLERDAQQLAELECVNNGKSAQIARVMDVQLSIDFLRYMAGWATKIEGATVDVSMPLMPDSQFHGFIRR
EAVGVVGAIVAWNFPLLLACWKLGPALATGCTMVLKPADETPLTALRLAELVQEAGYPTGVFNVVTGTGAEAGAALAHHP
DVDKLTFTGSTEVGKLIGKAAMESMTRVTLELGGKSPTIVFDDADPAVAASGAATAIFFNHGQVCCAGSRLYVQRKHFDR
VVGDIAGIASNMKLGNALDPSVDMGPLISAKQQKRVAGYIERGRELGAQLACGGEAYGPGYFVKPTVLVDVDQKGPLVQE
EIFGPVLVAMPFDTIDDAIRLANDTRYGLGASIWTNNLSAAHRMIPKIRSGSVWVNCHSALDPALPFGGYRMSGFGREMG
AAAIEHYTELKSVLMNV

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
ORF SG19 AAN62241.1 putative aldehyde dehydrogenase Not tested PAGI-3(SG) Protein 6e-71 44
VC0819 NP_230467.2 aldehyde dehydrogenase Not tested VPI-1 Protein 5e-72 41
aldA AAC12273.1 aldehyde dehydrogenase Virulence VPI Protein 3e-74 41
aldA AAK20747.1 aldehyde dehydrogenase Virulence VPI Protein 3e-74 41
aldA AAK20776.1 aldehyde dehydrogenase Virulence VPI Protein 3e-74 41
aldA-1 YP_001216300.1 aldehyde dehydrogenase Not tested VPI-1 Protein 6e-74 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
GEM_5083 YP_006619163.1 NAD-dependent aldehyde dehydrogenase VFG0082 Protein 2e-72 41