Gene Information

Name : GEM_5042 (GEM_5042)
Accession : YP_006619123.1
Strain :
Genome accession: NC_018514
Putative virulence/resistance : Unknown
Product : potassium-translocating P-type ATPase subunit B
Function : -
COG functional category : -
COG ID : -
EC number : 3.6.3.12
Position : 2075483 - 2077567 bp
Length : 2085 bp
Strand : -
Note : -

DNA sequence :
ATGTCTCATATCGAAACCCCGATCCATCCGGCGGCGATGCCGGCCGGCACCGTGCCGCCGATGCGCTGGACGGCCGTGCT
GCGCGAGGCGTTCCGCAAGCTCGCACCGCAGGTGCAGTTGAAGAACCCGGTGATGTTCGTCGTCTATCTCGGCAGCATCG
TCACGACCGTGCTGTGGCTGCAGGCGCTGACCGGCAGCGCCGACGCACCGGCCGGCTTCATCTTCGCGGTCGCGTGCTGG
CTGTGGTTCACCGTGCTGTTCGCGAACGCGGCCGAGGCGCTGGCCGAAGGGCGCGGCAAGGCGCAGGCCGACGCGTTGCG
CGCGGCGCGCAAGCGCGTGTACGCAAAGGTGCTCGACGAGCCGAAGCAAGCCGGCAGCACGAGCCATCGCGTACCGAGCG
ACGAACTCGCGGCCGGCAGCATCGTGCTCGTCGAGGCTGGCGACACGATTCCGGCCGACGGCGAGGTGATCGACGGCGTC
GCGTCGGTCGACGAGTCGGCGATCACCGGCGAATCCGCGCCGGTGATCCGCGAGTCGGGCGGCGATTTCTCGTCGGTGAC
GGGCGGCACGCGCGTGCTGTCCGACTGGATCATCGTGAAGATCACCGCGCAACCGGGCGAAGCGTTCCTCGACCGGATGA
TCGCGATGGTCGAAGGCGCGAAGCGCGGCAAGACGCCGAACGAAGTCGCACTGACGATCCTGCTCGTCGCGCTGACGATC
ATCTTCCTGCTCGTCTGCGTGACGTTGCTGCCGTTCTCGCAGTTCAGCGTGCTGCTGAACGCGTCGGGCACCGCTGTGAG
CCTGACCGTGCTGATCGCGCTGCTCGTGTGCCTGATCCCGACGACGATTGGCGCGCTGCTGTCGGCGATCGGCATCGCGG
GGATGAGCCGCATGATGCGCGCGAACGTGCTCGCGACGTCGGGCCGCGCGATCGAGGCGGCCGGCGACGTCGACGTGCTG
CTGCTCGACAAGACCGGCACGATCACGCTCGGCAACCGCGAGGCCGTGCAGTTCCGGCCGGCGCCCGGCGTGGACGAGCG
CGCGCTGGCCGAGGCCGCGCAACTGTCGTCGCTGGCCGACGAAACGCCCGAAGGGCGCTCGATCGTCGCGCTCGCGAAGC
AGCGTTTCTCGCTGGACGTGGCGGCGGCCGACGGCAGCATCGCGGTGCCGTTCAGCGCACGCACGCGGATGAGCGGCCTC
GATATCGGCGAACGCCAGGTGCGCAAGGGCGCGGCGTCCGCGATCCGCGCGCATGTCGATGCGCTCGGCGGCGTGTTTCC
GCGGGCGGTCGAGACGGCCGTCAACGACATCGCGCGGCGCGGCGGTACGCCGCTCGTCGTCGCCGATGGCTCGACGGTGC
TCGGGGCGATCGAGCTGAAGGACATCGTCAAGCACGGGATCGCCGCGCGTTTCGCCGAGTTGCGCAAGGTCGGCGTGAAG
ACGGTGATGATCACCGGCGACAACCGGCTCACCGCGGCCGCGATCGCGGCGGAAGCCGGTGTCGACGACTACCTCGCCGA
AGCGACGCCCGAGGACAAGCTGCGGCTGATCCGCGAGCACCAGGCGAAGGGCCATCTCGTCGCGATGACGGGCGACGGCA
CCAACGACGCGCCGGCGCTCGCGCAGGCCGACGTGGCCGTCGCGATGCACAGCGGCACGCAGGCGGCGAAGGAGGCGGCC
AACATGGTCGACCTCGACAGCAACCCGACGAAGCTGATGCAGGTGGTCGAGGTCGGCAAGCAGATGATCATGACGCGCGG
CGCGCTGACCACCTTCAGCGTCGCGAACGATCTCGCGAAGTATTTCGCGATCATCCCGGCCGCGTTCGTCGCGACCTATC
CGGCGCTCGGCGCGCTGAACGTGATGGGGCTGCACAGCCCGGTGTCGGCGATCCTGTCGGCGGTGATCTTCAACGCGCTG
ATCATCGTCGCGCTGATTCCGCTCGCGCTGAAGGGTGTGAAGTATCGCGCGGAGCCGGCCGAAAAGCTGCTGGGGCGCAA
CCTGCTGATCTACGGGGTGGGCGGGATCGTCGCACCGTTCATCGGCATCAAGCTGATCGACATGCTGTTGACGCCGTTTA
TCTGA

Protein sequence :
MSHIETPIHPAAMPAGTVPPMRWTAVLREAFRKLAPQVQLKNPVMFVVYLGSIVTTVLWLQALTGSADAPAGFIFAVACW
LWFTVLFANAAEALAEGRGKAQADALRAARKRVYAKVLDEPKQAGSTSHRVPSDELAAGSIVLVEAGDTIPADGEVIDGV
ASVDESAITGESAPVIRESGGDFSSVTGGTRVLSDWIIVKITAQPGEAFLDRMIAMVEGAKRGKTPNEVALTILLVALTI
IFLLVCVTLLPFSQFSVLLNASGTAVSLTVLIALLVCLIPTTIGALLSAIGIAGMSRMMRANVLATSGRAIEAAGDVDVL
LLDKTGTITLGNREAVQFRPAPGVDERALAEAAQLSSLADETPEGRSIVALAKQRFSLDVAAADGSIAVPFSARTRMSGL
DIGERQVRKGAASAIRAHVDALGGVFPRAVETAVNDIARRGGTPLVVADGSTVLGAIELKDIVKHGIAARFAELRKVGVK
TVMITGDNRLTAAAIAAEAGVDDYLAEATPEDKLRLIREHQAKGHLVAMTGDGTNDAPALAQADVAVAMHSGTQAAKEAA
NMVDLDSNPTKLMQVVEVGKQMIMTRGALTTFSVANDLAKYFAIIPAAFVATYPALGALNVMGLHSPVSAILSAVIFNAL
IIVALIPLALKGVKYRAEPAEKLLGRNLLIYGVGGIVAPFIGIKLIDMLLTPFI

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
kdpB NP_814334.1 potassium-transporting ATPase subunit B Not tested Not named Protein 5e-166 62
ef0088 AAM75291.1 EF0088 Not tested Not named Protein 3e-166 62
SAR0071 YP_039539.1 potassium-transporting ATPase subunit B Not tested Type-II SCCmec Protein 1e-136 56
kdpB(SCCmec) NP_370597.1 potassium-transporting ATPase subunit B Not tested Type-II SCCmec Protein 1e-136 56
kdpB NP_373310.1 potassium-transporting ATPase subunit B Not tested Type-II SCCmec Protein 1e-136 56
kdpB YP_190029.1 potassium-transporting ATPase subunit B Not tested Type-II SCCmec Protein 1e-136 56
kdpB YP_251949.1 potassium-transporting ATPase subunit B Not tested SCCmec Protein 3e-137 56
kdpB BAA82181.1 potassium-transporting ATPase(B chanin) Not tested Type-II SCCmec Protein 8e-137 56