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Name : GEM_3343 (GEM_3343) Accession : YP_006617430.1 Strain : Genome accession: NC_018514 Putative virulence/resistance : Virulence Product : betaine aldehyde dehydrogenase Function : - COG functional category : - COG ID : - EC number : 1.2.1.8 Position : 175865 - 177334 bp Length : 1470 bp Strand : - Note : - DNA sequence : ATGTCCGTATACGGTTTGCAGCGCCTCTACATCGGCGGCGGTTACGTCGACGCCACCAGCGGCAAGACTTTCGACACCTT CGATCCCGCCACCGGCGAACTGCTCGCGCAGGTGCAGCAGGCGAGCGCGGCCGATGTCGACCGTGCGGTCGCCTCGGCGC AGGAAGGCCAGCGCGAATGGGCCGCGATGACCGCGATGCAGCGCTCGCGGATCCTGCGCCGCGCGGTCGAGCTGCTGCGC GAACGCAACGACGAACTCGCAGCCATCGAGACGCGCGACACCGGCAAGCCGATCGGCGAGACGCTCGCGGTCGACATCGT CACCGGCGCGGACGTGATCGAGTACTACGCGGGCCTCGCGACCGCGATCGAAGGGCTGCAGGTGCCGCTGCGCGCCGAGT CGTTCGTCTATACGCGCCGCGAGCCGCTCGGCGTGTGCGCGGGCATCGGTGCATGGAACTACCCGATCCAGATCGCATGC TGGAAGACGGCGCCCGCGCTCGCGGCCGGCAACGCGATGGTGTTCAAGCCGAGCGAAGTCACGCCGCTGACCGCGCTGAA GCTCGCGGAAATCTATACGGAAGCCGGCGTGCCGGCCGGCGTGTTCAACGTCGTCCAGGGCGACGGCTCGGTCGGCGCGC TGCTCACCGGCCACCCGGACATCGCGAAGGTGTCGTTCACCGGTGGCGTCGAAACCGGCAAGAAGGTGATGTCGCTGGCC GGCGCATCGTCGCTGAAGGAAGTGACGATGGAACTCGGCGGCAAGTCGCCGCTGATCGTGTTCGAGGATGCCGACCTCGA CCGCGCCGCCGACATCGCGGTGACCGCCAACTTCTTCAGCTCTGGCCAGGTCTGCACCAACGGCACCCGCGTGTTCGTGC ACCGCTCGATCAAGGACACGTTCACGCAGAAGGTGCTCGAACGCGTGAAGCGCATCCGCGTCGGCAAGCCGACCGATGCC GACACCAACTTCGGCCCGCTCGTGTCGGCCGCGCAGCTCGACAAGGTGCTCGGTTTCATCGACAGCGGCAAGGCCGAAGG CGCGAAGCTGCTCGCCGGCGGCACGCGCCTGACCGACGGTCACTTCGGCAGCGGCCAGTATGTCGCGCCGACCGTGTTCG GCGACTGCCGCGACGACATGAAGATCGTCCGCGAGGAAATCTTCGGGCCGGTGATGAGCATCCTCGATTTCGAATCGGAG GACGAAGTGATTGCCCGCGCGAACAATACGCACTACGGCCTCGCGGCCGGCGTCGTGACCGAGAACCTGTCGCGCGCGCA TCGCACGATCCACCGCCTCGAAGCCGGCATCTGCTGGATCAACACGTGGGGCGAATCGCCGGCCGAGATGCCGGTTGGCG GATACAAGCAATCCGGTGTCGGACGAGAGAACGGCATCACGACGCTCGAACACTACACTCGAATCAAATCGGTACAGGTC GAGCTCGGCCGCTACAACCCGGTGTTTTGA Protein sequence : MSVYGLQRLYIGGGYVDATSGKTFDTFDPATGELLAQVQQASAADVDRAVASAQEGQREWAAMTAMQRSRILRRAVELLR ERNDELAAIETRDTGKPIGETLAVDIVTGADVIEYYAGLATAIEGLQVPLRAESFVYTRREPLGVCAGIGAWNYPIQIAC WKTAPALAAGNAMVFKPSEVTPLTALKLAEIYTEAGVPAGVFNVVQGDGSVGALLTGHPDIAKVSFTGGVETGKKVMSLA GASSLKEVTMELGGKSPLIVFEDADLDRAADIAVTANFFSSGQVCTNGTRVFVHRSIKDTFTQKVLERVKRIRVGKPTDA DTNFGPLVSAAQLDKVLGFIDSGKAEGAKLLAGGTRLTDGHFGSGQYVAPTVFGDCRDDMKIVREEIFGPVMSILDFESE DEVIARANNTHYGLAAGVVTENLSRAHRTIHRLEAGICWINTWGESPAEMPVGGYKQSGVGRENGITTLEHYTRIKSVQV ELGRYNPVF |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| VC0819 | NP_230467.2 | aldehyde dehydrogenase | Not tested | VPI-1 | Protein | 1e-64 | 43 |
| ORF SG19 | AAN62241.1 | putative aldehyde dehydrogenase | Not tested | PAGI-3(SG) | Protein | 6e-70 | 42 |
| hpaE | AAO17179.1 | HpaE | Not tested | tcd island | Protein | 6e-71 | 41 |
| aldA | AAC12273.1 | aldehyde dehydrogenase | Virulence | VPI | Protein | 2e-66 | 41 |
| aldA | AAK20747.1 | aldehyde dehydrogenase | Virulence | VPI | Protein | 2e-66 | 41 |
| aldA | AAK20776.1 | aldehyde dehydrogenase | Virulence | VPI | Protein | 2e-66 | 41 |
| aldA-1 | YP_001216300.1 | aldehyde dehydrogenase | Not tested | VPI-1 | Protein | 4e-66 | 41 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| GEM_3343 | YP_006617430.1 | betaine aldehyde dehydrogenase | VFG0082 | Protein | 5e-65 | 43 |
