Gene Information

Name : GEM_4602 (GEM_4602)
Accession : YP_006618686.1
Strain :
Genome accession: NC_018514
Putative virulence/resistance : Virulence
Product : Ribonuclease III
Function : -
COG functional category : -
COG ID : -
EC number : 3.1.26.3
Position : 1576036 - 1577112 bp
Length : 1077 bp
Strand : +
Note : -

DNA sequence :
ATGTCAACGTACGCCAGAAAACCGCTGGTATCGCTCGTCGTGCCGTTCCACGACGAAGACGAAGCGATCGACGCGTTCTT
TGCCGAAACGCTGCCTGTTCTCGAGTCGGTCGACACGGTCCGCTTCGAGATCGTCTGCATCAACGACGGCAGCCGCGATC
GCACGCTCGACCGGCTGCTCGCGGTCGCGGCTGGCGACCCGCGGGTGCGCGTCATCGATCTCACGCGCCGCTTCGGCAAG
GAGGCCGCGCTCACCGCCGGGCTCGACGAAGCGGCCGGCGCCGCGGTGATCCTGATCGACGCCGACCTGCAGGATCCCCC
TGCGCTGATTCCCGCGATGATCGAGCGCTGGCGCGCCGGCGCCGAGGTCGTCGCCGCGAAGCGCACCAACCGGAGGTGCG
ATCCGTACATGCAGCGCGCGGCGGCGGCGCTCTACTATCGCGTGCACAACGCGCTGTCCGAAGTGGCAATGCCCGAGAAC
GTCGGCGATTTCCGCCTGATGGACCGCGAGGTCGTCGACGCGCTGCGCGCGCTGCCCGAGCGGCGGCGCTTCATGAAAGG
GTTGTTCGCGTGGGTCGGCTACCGCACCGCGATCGTCGAATACACGCGCGCGCCGCGCAGCGGCGGCCGCTCGAAGTTCT
CCGGATGGCGGCGCTGGAACTTCGCGCTCGAGGGCATCACGAGCTTCAGCACCGTGCCGCTGCGCGTCTGGACCTACGTC
GGCCTCACGTTCGCCATGCTGTCGCTGGCGTACGGCGCGTTCATCGTCGTGCGCACACTGCTGTTCGGCAATCCGGTGCA
CGGCTACCCGTCGCTGATTTCGGTCGTGCTGTTCGTGGGCGGCATCCAGCTGATCGGCATCGGCGTGATCGGCGAATACC
TCGGCCGCATCTATCACGAGTCGAAGCAGCGCCCCGTCTATCTGGTGCGGCGACGCTACCGCGCCGAGCGGGACGCCGCC
GCGCAGCCGGCGTCGAAGCTGCTGCCGTTCCCGGTCAAGCGCGTACACGCGGCCCGGCGTCGCACGGCGATGCCGGCGGC
CAACGGCCAAGGCGGCCGCAAAGCGTCGTTCAAGTAG

Protein sequence :
MSTYARKPLVSLVVPFHDEDEAIDAFFAETLPVLESVDTVRFEIVCINDGSRDRTLDRLLAVAAGDPRVRVIDLTRRFGK
EAALTAGLDEAAGAAVILIDADLQDPPALIPAMIERWRAGAEVVAAKRTNRRCDPYMQRAAAALYYRVHNALSEVAMPEN
VGDFRLMDREVVDALRALPERRRFMKGLFAWVGYRTAIVEYTRAPRSGGRSKFSGWRRWNFALEGITSFSTVPLRVWTYV
GLTFAMLSLAYGAFIVVRTLLFGNPVHGYPSLISVVLFVGGIQLIGIGVIGEYLGRIYHESKQRPVYLVRRRYRAERDAA
AQPASKLLPFPVKRVHAARRRTAMPAANGQGGRKASFK

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
gtrBI AAF09026.1 GtrBI Not tested SHI-O Protein 1e-67 57
ESA_03027 YP_001439092.1 hypothetical protein Not tested Not named Protein 2e-69 57

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
GEM_4602 YP_006618686.1 Ribonuclease III VFG0670 Protein 5e-68 56