Gene Information

Name : GEM_4334 (GEM_4334)
Accession : YP_006618418.1
Strain :
Genome accession: NC_018514
Putative virulence/resistance : Virulence
Product : two component heavy metal response transcriptional regulator
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 1272204 - 1272899 bp
Length : 696 bp
Strand : +
Note : -

DNA sequence : 
ATGAAAGTCCTGATCGTCGAAGACGAACCGAAAGTCGTCGAATACCTGAAGAGCGGCCTGACCGAGGAAGGCTGGGTCGT
CGATACCGCGCTCGACGGCGAGGACGGTGCGTGGAAGGCCGTCGAATTCGACTACGACGTGGTCGTGCTCGACGTGATGC
TGCCGAAGCTCGACGGCTTCGGCGTGCTGCGCGCGTTGCGCGCGCAGAAGCAGACGCCCGTCATCATGCTGACCGCGCGC
GACCGCGTGGACGACCGCGTGCGCGGGCTGCGCGGTGGCGCCGACGACTACCTGACCAAGCCCTTCTCGTTCCTCGAGCT
GATCGAGCGGCTGCGTGCGCTGACGCGCCGCGCGCGCGTGCAGGAATCGACGCTGATCTCGATCGGCGACCTGCGCGTCG
ACCTGATCGGCCGGCGCGCGACCCGCGACGGCACGCGCCTCGACCTGACCGCGCAGGAATTCCAGCTGCTCGGCGTGCTC
GCGCGGCGCAGCGGCGAGGTGCTGTCGAAAACCACGATCGCCGAGCTCGTGTGGGACGTGAACTTCGACAGCAACGCGAA
CGTCGTCGAGACGGCGATCAAGCGGCTGCGCGCGAAGCTCGACGGCCCGTTCGCGGAGAAGCTGCTGCACACGATCCGCG
GGATGGGCTACGTGCTCGAGGCCCGCGAGGAAGGCGACGCGGAGCGGCACCCATGA

Protein sequence : 
MKVLIVEDEPKVVEYLKSGLTEEGWVVDTALDGEDGAWKAVEFDYDVVVLDVMLPKLDGFGVLRALRAQKQTPVIMLTAR
DRVDDRVRGLRGGADDYLTKPFSFLELIERLRALTRRARVQESTLISIGDLRVDLIGRRATRDGTRLDLTAQEFQLLGVL
ARRSGEVLSKTTIAELVWDVNFDSNANVVETAIKRLRAKLDGPFAEKLLHTIRGMGYVLEAREEGDAERHP

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
copR NP_460069.2 transcriptional regulatory protein YedW Not tested SPI-5 Protein 3e-41 53
copR AAC33719.1 regulatory protein CopR Not tested SPI-5 Protein 4e-40 51

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
GEM_4334 YP_006618418.1 two component heavy metal response transcriptional regulator BAC0083 Protein 3e-48 59
GEM_4334 YP_006618418.1 two component heavy metal response transcriptional regulator BAC0125 Protein 1e-52 58
GEM_4334 YP_006618418.1 two component heavy metal response transcriptional regulator BAC0197 Protein 2e-47 54
GEM_4334 YP_006618418.1 two component heavy metal response transcriptional regulator BAC0638 Protein 4e-39 54
GEM_4334 YP_006618418.1 two component heavy metal response transcriptional regulator BAC0111 Protein 3e-45 51
GEM_4334 YP_006618418.1 two component heavy metal response transcriptional regulator BAC0308 Protein 1e-45 51
GEM_4334 YP_006618418.1 two component heavy metal response transcriptional regulator BAC0347 Protein 1e-40 48
GEM_4334 YP_006618418.1 two component heavy metal response transcriptional regulator CP000675.2.gene1535. Protein 6e-30 41
GEM_4334 YP_006618418.1 two component heavy metal response transcriptional regulator CP001918.1.gene5135. Protein 2e-14 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
GEM_4334 YP_006618418.1 two component heavy metal response transcriptional regulator VFG0596 Protein 1e-41 53
GEM_4334 YP_006618418.1 two component heavy metal response transcriptional regulator VFG1389 Protein 4e-31 48
GEM_4334 YP_006618418.1 two component heavy metal response transcriptional regulator VFG1386 Protein 3e-26 42