Gene Information

Name : GEM_0815 (GEM_0815)
Accession : YP_006614957.1
Strain :
Genome accession: NC_018513
Putative virulence/resistance : Virulence
Product : two component transcriptional regulator
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 900267 - 900899 bp
Length : 633 bp
Strand : +
Note : -

DNA sequence :
ATGATTGCCGAAGGCGTACGCAAGGCGCTGCGCTCCGACGGCTTCGCGGTCGACTGGGTGCAGGACGGCGACGCGGCGCT
CACGGCGCTCGGCGGCGAGACGTACGACCTGCTGCTGCTCGATCTCGGCCTGCCGAAGCGCGACGGCATCGACGTGCTGC
GCACGCTGCGCGCGCGCGGGCTGTCGCTGCCGGTGCTGATCGTCACCGCGCGCGACGCGGTCGCCGATCGCGTGAAGGGG
CTCGACGCGGGCGCCGACGACTACCTCGTCAAGCCGTTCGACCTCGACGAACTGGGCGCACGGATGCGCGCGCTGATCCG
CCGCCAGGCGGGGCGCAGCGAGTCGCTGATCCGCCACGGCGCGCTGACGCTCGATCCCGCGTCGCACCAGGTGACGCTCG
ACGGTGCGCCCGTCGCGCTGTCCGCGCGCGAGTTCGCGCTGCTGGAGGCGCTGCTCGCGCGGCCCGGCGCAGTGCTGTCG
AAGAGCCAGCTCGAGGAGAAGATGTACGGCTGGGGCGAGGAGATCGGCAGCAACACGGTCGAGGTCTACATCCACGCGCT
GCGCAAGAAGCTCGGTTCGGACCTGATCCGCAACGTGCGCGGGCTCGGCTACATGGTCGTCAAGGAAAGCTGA

Protein sequence :
MIAEGVRKALRSDGFAVDWVQDGDAALTALGGETYDLLLLDLGLPKRDGIDVLRTLRARGLSLPVLIVTARDAVADRVKG
LDAGADDYLVKPFDLDELGARMRALIRRQAGRSESLIRHGALTLDPASHQVTLDGAPVALSAREFALLEALLARPGAVLS
KSQLEEKMYGWGEEIGSNTVEVYIHALRKKLGSDLIRNVRGLGYMVVKES

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
copR NP_460069.2 transcriptional regulatory protein YedW Not tested SPI-5 Protein 2e-17 43

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
GEM_0815 YP_006614957.1 two component transcriptional regulator BAC0083 Protein 1e-20 46
GEM_0815 YP_006614957.1 two component transcriptional regulator BAC0197 Protein 4e-22 45
GEM_0815 YP_006614957.1 two component transcriptional regulator NC_002516.2.879194.p Protein 2e-20 45
GEM_0815 YP_006614957.1 two component transcriptional regulator BAC0638 Protein 7e-19 44
GEM_0815 YP_006614957.1 two component transcriptional regulator BAC0111 Protein 5e-18 42
GEM_0815 YP_006614957.1 two component transcriptional regulator BAC0347 Protein 4e-18 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
GEM_0815 YP_006614957.1 two component transcriptional regulator VFG0473 Protein 2e-28 49
GEM_0815 YP_006614957.1 two component transcriptional regulator VFG1390 Protein 1e-25 45
GEM_0815 YP_006614957.1 two component transcriptional regulator VFG0596 Protein 5e-18 43
GEM_0815 YP_006614957.1 two component transcriptional regulator VFG1389 Protein 3e-21 42