|
Name : GEM_0059 (GEM_0059) Accession : YP_006614214.1 Strain : Genome accession: NC_018513 Putative virulence/resistance : Virulence Product : lytic transglycosylase catalytic subunit Function : - COG functional category : - COG ID : - EC number : - Position : 61245 - 61694 bp Length : 450 bp Strand : + Note : - DNA sequence : ATGAACAGACGGTTCGCATCGATCGCGTTGATCGCCGCCGGCGTGTGGTTCGCCTGCGGAAACGCTCGCGCGGATTGTTT CGACGAGGCCGCCCGCTACCAGAAGGTCAATCCGCTGATCCTGCGTGCGATCGCCTGGCAGGAATCGCGCAACCGGCCCG ACGCGCAGAACAAGAACACGAACGGCTCGGTCGACTACGGCCTGATGCAGATCAATTCGATTCACCTGCCGGCGCTGTCG CGCTACGGCATCGGCCGCGACACGCTGATGGAACCGTGCAAGAACGTCTACATCGCCGCGTGGCATCTGCGCCAGAAGAT GAATCGCTACGGCAACACCTGGCAGGCCGTCGGCGCCTATCATTCTGAAACGCCGTCGCTGCGCGACAAGTATGCGCGGC AGATCGCCGGCATCCTGACGCAGTGGAAGCTGCTGCCGCCCACGCCGTGA Protein sequence : MNRRFASIALIAAGVWFACGNARADCFDEAARYQKVNPLILRAIAWQESRNRPDAQNKNTNGSVDYGLMQINSIHLPALS RYGIGRDTLMEPCKNVYIAAWHLRQKMNRYGNTWQAVGAYHSETPSLRDKYARQIAGILTQWKLLPPTP |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| hpaH | AAL78295.1 | HpaH precursor | Virulence | Hrp PAI | Protein | 4e-36 | 71 |
| hpaH | YP_362172.1 | transglycosylase HpaH | Virulence | Hrp PAI | Protein | 6e-36 | 71 |
| hpa2 | AAF61278.1 | Hpa2 precursor | Virulence | Hrp PAI | Protein | 1e-35 | 69 |
| hpa2 | NP_640772.1 | Hpa2 protein | Virulence | Hrp PAI | Protein | 2e-36 | 67 |
| XC_3001 | YP_244069.1 | Hpa2 protein | Virulence | Hrp PAI | Protein | 4e-36 | 67 |
| hpa2 | NP_636615.1 | Hpa2 protein | Virulence | Hrp PAI | Protein | 4e-36 | 67 |
| ECO103_3629 | YP_003223486.1 | hypothetical protein | Not tested | LEE | Protein | 3e-17 | 42 |
| unnamed | AAK26704.1 | unknown | Not tested | LEE | Protein | 2e-17 | 42 |
| ECO26_5260 | YP_003232142.1 | hypothetical protein | Not tested | LEE | Protein | 3e-17 | 42 |
| unnamed | AAL57531.1 | unknown | Not tested | LEE | Protein | 2e-17 | 42 |
| st13 | CAC81851.1 | ST13 protein | Not tested | LEE II | Protein | 2e-17 | 42 |
| unnamed | CAI43885.1 | hypothetical protein | Not tested | LEE | Protein | 2e-17 | 42 |
| unnamed | AAC38373.1 | rOrf3 | Not tested | LEE | Protein | 4e-16 | 41 |
| Z5131 | NP_290279.1 | hypothetical protein | Not tested | LEE | Protein | 1e-16 | 41 |
| unnamed | AAC31524.1 | L0045 | Not tested | LEE | Protein | 8e-17 | 41 |
| ECs4579 | NP_312606.1 | hypothetical protein | Not tested | LEE | Protein | 1e-16 | 41 |
| unnamed | ACU09469.1 | putative lytic transglycosylase | Not tested | LEE | Protein | 8e-17 | 41 |
| ECO111_3763 | YP_003236099.1 | hypothetical protein | Not tested | LEE | Protein | 1e-16 | 41 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| GEM_0059 | YP_006614214.1 | lytic transglycosylase catalytic subunit | VFG0994 | Protein | 2e-10 | 45 |
| GEM_0059 | YP_006614214.1 | lytic transglycosylase catalytic subunit | VFG0823 | Protein | 3e-17 | 41 |
| GEM_0059 | YP_006614214.1 | lytic transglycosylase catalytic subunit | VFG0719 | Protein | 2e-16 | 41 |
