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Name : GEM_0057 (GEM_0057) Accession : YP_006614212.1 Strain : Genome accession: NC_018513 Putative virulence/resistance : Virulence Product : general secretory pathway protein E Function : - COG functional category : - COG ID : - EC number : 3.6.1.15 Position : 57069 - 58568 bp Length : 1500 bp Strand : - Note : - DNA sequence : GTGAGCAACGTGCTCGCGTCCTCTGCCCAAGACGGCGCGCCGGGCGAACGGCAGCCGCCGTCGCCGCTTGCCGCGCGCCT GTTGCCGTACGGCTTCGCGAAGAGCGGCCAGGTGCTGATCGCGCACCAGCTCGACGACGCGCTCGAGGTGTGGGTCAGCG AGCGCACGAACGATGCGGCGCTCGCCGAAATCGCGCGCAACTTCGGTTCGATTTCCGTGCATCGCGTGCCGGCCGACGAG CTCGCGCAGGCGATCAACCAGGCCTACGCGCGCCAGGACGGCAGCGCGGCGCAGATCGTCGGCGAGGTCGAAGGCGAAGT CGACCTGTCGCGACTGATGCAGGACATCCCCGAAGTCGAAGATCTGCTCGAGTCGGAAGACGACGCGCCGATCATCCGGA TGATCAACGCGCTGCTCACTCAAGCGGCGCGCGAACAGGCATCGGACATTCACATCGAGCCGTTCGAGAATGCGTCGGTC GTGCGGTTTCGCGTCGACGGCACGCTGCGCGACGTCGTGCGCCCGAAGAAGGCGCTGCACGGCGCGCTGATCTCGCGGAT CAAGATCATGGCGCAACTCGACATCGCCGAGAAACGCCTGCCGCAGGACGGCCGCATCACGCTGCGTGTCGGCGGCCGGC CGGTCGACGTGCGGGTGTCGACGCTGCCGACCGGGCACGGCGAGCGGGCGGTGCTGCGTCTCCTGGAAAAGGATGCGCAG CGCCTGAACCTCGAAGCGCTCGGGATGGGCCGCGACACGCTTGGCCAGTTCGACAAGCTGATCGGCCGCCCGCACGGGAT CGTGCTGGTGACGGGCCCGACCGGCTCGGGCAAGACGACGACGCTGTACGCGTCGATGTCGCGGCTCGAGACGGCGACGA CCAACATCATGACCGTCGAGGACCCGATCGAATACGACCTGTCCGGCATCGGCCAGACGCAGGTGAACGAGCGGATCGGG ATGACCTTTGCCCGTGCGCTGCGTTCGATCCTGCGCCAGGACCCGGACGTGATCATGATCGGCGAAATCCGCGATCTCGA AACCGCGCAGATCGCGGTGCAGGCGTCGCTGACGGGCCACCTCGTGCTCGCGACGCTGCACACCAACGATGCGGCATCGG CGGTCACGCGTCTGACCGACATGGGCGTCGAGCCGTACCTGCTCGCGTCGTCGCTGCTCGGCGTGCTCGCGCAGCGCCTG GTGCGCCAGTTGTGCCCGGTCTGCAAGGAAGAGCGGCACGAGGAAGGTCGCACCGTCTGGCATCCGGTCGGCTGCGCCAA GTGCGGCCATTCGGGTTATGCGGGCCGGCGCGGCGTATACGAACTGCTGGTGATCGACGACTCGATCCGCACGCTGATCC ACCGCAACGCGGCCGATGCGGAGATTCTCGCCGCGGGCCGCGCGGAAGGGATGCGCACACTGCGCGACGACGCCGAGCGC TGGCTCGCGGCCGGGGCGACGTCGCTCGAGGAAGTGCTGCGCGTGACGGGAGGCGCGTAG Protein sequence : MSNVLASSAQDGAPGERQPPSPLAARLLPYGFAKSGQVLIAHQLDDALEVWVSERTNDAALAEIARNFGSISVHRVPADE LAQAINQAYARQDGSAAQIVGEVEGEVDLSRLMQDIPEVEDLLESEDDAPIIRMINALLTQAAREQASDIHIEPFENASV VRFRVDGTLRDVVRPKKALHGALISRIKIMAQLDIAEKRLPQDGRITLRVGGRPVDVRVSTLPTGHGERAVLRLLEKDAQ RLNLEALGMGRDTLGQFDKLIGRPHGIVLVTGPTGSGKTTTLYASMSRLETATTNIMTVEDPIEYDLSGIGQTQVNERIG MTFARALRSILRQDPDVIMIGEIRDLETAQIAVQASLTGHLVLATLHTNDAASAVTRLTDMGVEPYLLASSLLGVLAQRL VRQLCPVCKEERHEEGRTVWHPVGCAKCGHSGYAGRRGVYELLVIDDSIRTLIHRNAADAEILAAGRAEGMRTLRDDAER WLAAGATSLEEVLRVTGGA |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| gspE | YP_854406.1 | type II secretion protein GspE | Not tested | PAI I APEC-O1 | Protein | 9e-118 | 53 |
| gspE | CAE85233.1 | GspE, hypothetical type II secretion protein | Not tested | PAI V 536 | Protein | 7e-118 | 53 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| GEM_0057 | YP_006614212.1 | general secretory pathway protein E | VFG0182 | Protein | 3e-126 | 56 |
| GEM_0057 | YP_006614212.1 | general secretory pathway protein E | VFG2048 | Protein | 1e-117 | 53 |
| GEM_0057 | YP_006614212.1 | general secretory pathway protein E | VFG1876 | Protein | 1e-118 | 52 |
| GEM_0057 | YP_006614212.1 | general secretory pathway protein E | VFG2426 | Protein | 2e-77 | 49 |
| GEM_0057 | YP_006614212.1 | general secretory pathway protein E | VFG0233 | Protein | 2e-86 | 49 |
| GEM_0057 | YP_006614212.1 | general secretory pathway protein E | VFG0112 | Protein | 2e-80 | 44 |
