Gene Information

Name : GEM_0453 (GEM_0453)
Accession : YP_006614598.1
Strain :
Genome accession: NC_018513
Putative virulence/resistance : Virulence
Product : aldehyde dehydrogenase
Function : -
COG functional category : -
COG ID : -
EC number : 1.2.1.-
Position : 505411 - 506901 bp
Length : 1491 bp
Strand : +
Note : -

DNA sequence :
ATGAACAAGTTGACTTTGGCTGACTGGCAGGACAAGGCGGCGTCGCTCGAGATCGATGGGCGCGCATTCATCGACGGCGC
GTCGCGAGACGCGCACGGCGGCAAGACGTTCGACTGCGTGAGCCCGATCGACGGCCGCGTGCTCGCGAAGGTGGCCGATT
GCGGCGAAGCCGACGTGAACGCCGCCGTCGCGGCCGCGCGCCGCGCGTTCGACGCGGGCGTGTGGGCCGGATTGAACCCG
CGCGCGCGCAAGGCCGTGCTGCTGCGCTGGGGCGCGCTGATGCGCGAGCATCTCGACGAACTGGCGCTGCTGGAGACGCT
CGACGCGGGCAAGCCGATCGGCGACACGACGACGGTCGATGTGCCGGGCGCCGCGTATTGCGTCGAGTGGTTCGCCGAGG
CGATCGACAAGGTCGGCGGCGAGGTCGCGCCGGCCGACCATCATCTCGTCGGCCTCGTCACGCGCGAACCGGTCGGCGTG
GTGGCGGCCGTCGTGCCGTGGAACTTCCCGATCCTGATGGCCGCATGGAAGTTCGGCCCGGCACTCGCGGCCGGCAACAG
CGTCGTGCTGAAGCCGTCGGAGAAGTCGCCGCTGACCGCGATCCGCGTCGCGCAGCTCGCATACGAGGCCGGCATCCCGG
CGGGCGTGTTCAACGTCGTGCCGGGCGCGGGCGAACCGGGCAAGCTGCTCGCGCTGCACCGCGACGTCGACTGCATCGCA
TTCACCGGCTCCACCGCGGTCGGCAAGCTGATCATGCAGTACGCCGCGCAGTCGAACCTGAAGCGCGCGTGGCTCGAACT
TGGCGGCAAGTCGCCGAACATCGTGCTGCCCGATTGTCCGGATCTCGACCGCGCCGCGCAGGCCGCGGCCGGTGCGATCT
TCTACAACATGGGCGAGATGTGCACGGCGGGCTCGCGGCTGCTCGTGCATCGCGACATCAAGGACGCGTTCATCGAGAAA
CTCGTCGCGGCCGCGCGTGCGTACGTGCCCGGCAATCCGCTCGATCCGTCGGTGTCGATGGGCGCGATCGTCGACGGCAT
CCAGCTCGAACGCGTGCTTGGCTACATCGACGCCGGGCGCAAGGAAGGCACGCTCGTGACGGGCGGCGCGCGCGTGAAGG
AGGAGTCGGGCGGCTTCTACGTCGAGCCGACCGTGTTCGAGGTGAAGCCCGATGCCAGGATCGCGCGCGAGGAGATCTTC
GGCCCCGTGCTGTCGGTGATCGTGTTCGACGATGTCGACGAGGCGGTGCGGATCGCGAACGATACCGAGTACGGGCTCGC
GGCGGCCGTATGGACGTCGGACCTGACGACCGCGCACGACGTGTCGCGCCGGCTGCGGGCGGGCACGGTATGGGTGAACT
GCTACGACGAGGGCGGCGACATGAACTTCCCGTTCGGCGGCTACAAGCAGTCGGGCAACGGCCGCGACAAGTCGCTGCAC
GCGCTCGAGAAGTACACCGAGCTGAAGTCGACGCTGATCCGGCTGCGCTGA

Protein sequence :
MNKLTLADWQDKAASLEIDGRAFIDGASRDAHGGKTFDCVSPIDGRVLAKVADCGEADVNAAVAAARRAFDAGVWAGLNP
RARKAVLLRWGALMREHLDELALLETLDAGKPIGDTTTVDVPGAAYCVEWFAEAIDKVGGEVAPADHHLVGLVTREPVGV
VAAVVPWNFPILMAAWKFGPALAAGNSVVLKPSEKSPLTAIRVAQLAYEAGIPAGVFNVVPGAGEPGKLLALHRDVDCIA
FTGSTAVGKLIMQYAAQSNLKRAWLELGGKSPNIVLPDCPDLDRAAQAAAGAIFYNMGEMCTAGSRLLVHRDIKDAFIEK
LVAAARAYVPGNPLDPSVSMGAIVDGIQLERVLGYIDAGRKEGTLVTGGARVKEESGGFYVEPTVFEVKPDARIAREEIF
GPVLSVIVFDDVDEAVRIANDTEYGLAAAVWTSDLTTAHDVSRRLRAGTVWVNCYDEGGDMNFPFGGYKQSGNGRDKSLH
ALEKYTELKSTLIRLR

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
ORF SG19 AAN62241.1 putative aldehyde dehydrogenase Not tested PAGI-3(SG) Protein 8e-117 59
VC0819 NP_230467.2 aldehyde dehydrogenase Not tested VPI-1 Protein 4e-67 42
aldA AAC12273.1 aldehyde dehydrogenase Virulence VPI Protein 6e-68 42
aldA AAK20747.1 aldehyde dehydrogenase Virulence VPI Protein 6e-68 42
aldA AAK20776.1 aldehyde dehydrogenase Virulence VPI Protein 6e-68 42
aldA-1 YP_001216300.1 aldehyde dehydrogenase Not tested VPI-1 Protein 1e-67 42
hpaE AAO17179.1 HpaE Not tested tcd island Protein 3e-60 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
GEM_0453 YP_006614598.1 aldehyde dehydrogenase VFG0082 Protein 2e-67 42