Gene Information

Name : GEM_0341 (GEM_0341)
Accession : YP_006614487.1
Strain :
Genome accession: NC_018513
Putative virulence/resistance : Virulence
Product : chaperone protein FimC
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 387726 - 388490 bp
Length : 765 bp
Strand : -
Note : -

DNA sequence : 
ATGGTGATGCCAATCAACTGGCGCTCGAGCGTGGGCGCCGCGGCGGTGGTTGCGTCGATGTCCGGCATGGGCGCGGCGGA
CGCGAGCGTGGTCATCAGCGGGACACGCGTGATCTATCCCGAGAAGGAACGCGAAGTCACGGTCAAGCTGACCAACAATG
GCGACAGGCCGTCACTCGTGCAGGCCTGGGTAGACGACGGCATTGCGAACGCCCTGCCTGACGATTCGAAAGTGCCGTTC
ACGCTGACCCCGCCGTTGTTCCGCCTCGATCCGAACAAAGGCCAGAGCCTGCGGCTGATCTACACGAAGGAGCCGCTCGC
GCAGGACAAGGAAACGCTGTACTGGCTCAACGTGCTCGACGTTCCGCCGCAGGCCACCGACGATCCGGACACCCCCAACT
TGCTGCAGCTCGCGTTCCGTTCGCGCATCAAGCTGTTCTTCCGTCCTGCCGCACTGCAAGGCGTGGCCGACGAGTCTGCG
GAGAAGGTGACCTGGAACTTCGCGCCGAAGGCCGACGGTGGCTATGCATTGCAGGCGAAGAACCCGACGCCCTACCACGT
GACGTTCACCAGGCTCACCGTCAAGTCTGGCGGCGCAACGTGGAGCAACGACAAGGGCGGCATGGTCAAGCCCGGCGCCA
CCGAGCAATTCGACGTCGGCAACGTGCCGCCGCTGCCTGCCGGACCGATCGAGGTCGACTACACGTTCCTCAACGACTAC
GGCGGCGGCGTCGAAGGCAACTACGCGCCAAGGAAAGTGCACTGA

Protein sequence : 
MVMPINWRSSVGAAAVVASMSGMGAADASVVISGTRVIYPEKEREVTVKLTNNGDRPSLVQAWVDDGIANALPDDSKVPF
TLTPPLFRLDPNKGQSLRLIYTKEPLAQDKETLYWLNVLDVPPQATDDPDTPNLLQLAFRSRIKLFFRPAALQGVADESA
EKVTWNFAPKADGGYALQAKNPTPYHVTFTRLTVKSGGATWSNDKGGMVKPGATEQFDVGNVPPLPAGPIEVDYTFLNDY
GGGVEGNYAPRKVH

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed CAD33727.1 putative F17-like fimbrial chaperone Virulence PAI I 536 Protein 2e-38 41
ecpD1 AAO49832.1 pilin chaperone ecpD1 Not tested SPI-3 Protein 8e-42 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
GEM_0341 YP_006614487.1 chaperone protein FimC VFG0007 Protein 1e-35 43
GEM_0341 YP_006614487.1 chaperone protein FimC VFG1468 Protein 1e-38 41