Gene Information

Name : GEM_3062 (GEM_3062)
Accession : YP_006617152.1
Strain :
Genome accession: NC_018513
Putative virulence/resistance : Unknown
Product : transposase
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 3347187 - 3348770 bp
Length : 1584 bp
Strand : +
Note : -

DNA sequence :
ATGACCACGGCCAACGCCTATCCAGACGACATCGAAGCGCTCAAGGCCTTGCTGCTCGAGCGTGATGCCCAGGTCCGCGA
ACGCGACGCACGCATTGACCATCTGGAAGACCTGGTCGAATCGCACGAGGCCGTGGTGGCTACGGGCAAGGCCGAGATCG
AGCATCTGAAGCTGCTGATCGCGAAGCTCCGTCGCATGGCGTTCGGGCGCAGCTCGGAGAAACTGGATCGCCAGATTGAG
CAGCTCGAACTGAAGCTGGAAGATCTCGAAGCCGACGAAGGCGCCACGCCGATCGAACTCCCGAAGACGCCGCGTACAGC
CGCGGAGCAGATACAACGCAAGCCATTGCCGGAACATCTGCCGCGCGAGGTGCTGACGTACCTGCCCGAATCAGGCGAGA
TCTGCACGGCATGCGGTGCCGCGATAAAGCTGCTCGGCGAGGACGTGTCCGAACAACTCGAATACGTACCTGCCAGCTTC
CGTGTGATCCGTCATGTGCGGCCGAAGCTGGCTTGCACGTGTTGCGATCACATCGCCCAGGCGCCGGCGCCCAGCCGTCC
AATTGAACGTGGCCTGGCCGGCCCCGGCCTGCTGGCGCATGTGCTGGTGGCGAAGTTCGCGGACCATCTGCCGCTGTATC
GTCAGTCGGTGATCTATGCGCGCGAAGGCGTGGAACTCGATCGCTCGCTCTTGGCGAAATGGGTGGGCCACGGCGCGAAT
CTGTTGCAACCTCTGGTCGATGCGCTGCGTCGGCACGTAATGGCGGCTACGAAGTTGCATGCCGACGATACTCCCGTGCC
GGTGCTCGCGCCAGGCAACGGCAAGACCAAGACCGGACGGTTGTGGGTGTATGTGCGCGATGATCGGAACTCGGGCGACA
CCACGGCGCCGGCGGTTTGGTTCACCTACACCCCGGACCGCAAAGGCGAGCATCCGCAACAGCATCTTGCCAGGTTCAAA
GGCACGCTGCAGGCCGATGCCTATGGCGGTTACCAGAAGATCTACGAGCGTGGGGATGTCGTCGAGGCCGCGTGCTGGGC
GCATGCGCGGCGCAAGTTCTACGATATTCATGCTGTACGGCCGAATGCGCTGAACACCAAGGCACTGGAGCGCATCGGTG
CGCTTTACCGCATTGAAGACGAAATCCGGGGCGAACCACCCGATGCTCGGCAGGCCCACCGGCAAACGCATGCCAAACCC
CTGCTCGACGAACTCCACACATGGCTGACCGCCATGCTGGGAACACTCTCGCGCAAATCCGACACGAGTCAGGCGATCCT
GTATGCCTTGAATCGGTGGGCGGCATTGACGCGCTATTGCGATGACGGGCACCTAGAGATCGACAATCTACCCGCCGAGC
GGGCATTACGTAGTGTAGCCGTCGGCCGTCGCAACTACCTGTTCGCCGGCGCGGACTCTGGCGGCGAACGGGCGGCGGCA
ATCTACAGCCTGATTGGCTCGGCCAAACTCAACGGCATCGACCCCGAGGCGTATCTGCGTCATGTGCTCGGGCGCATCGC
GGATCACCCGATCAACCGGAGCGATGAACTGTTGCCCTGGCGTGTGACCGTCCTAGCCTCGTGA

Protein sequence :
MTTANAYPDDIEALKALLLERDAQVRERDARIDHLEDLVESHEAVVATGKAEIEHLKLLIAKLRRMAFGRSSEKLDRQIE
QLELKLEDLEADEGATPIELPKTPRTAAEQIQRKPLPEHLPREVLTYLPESGEICTACGAAIKLLGEDVSEQLEYVPASF
RVIRHVRPKLACTCCDHIAQAPAPSRPIERGLAGPGLLAHVLVAKFADHLPLYRQSVIYAREGVELDRSLLAKWVGHGAN
LLQPLVDALRRHVMAATKLHADDTPVPVLAPGNGKTKTGRLWVYVRDDRNSGDTTAPAVWFTYTPDRKGEHPQQHLARFK
GTLQADAYGGYQKIYERGDVVEAACWAHARRKFYDIHAVRPNALNTKALERIGALYRIEDEIRGEPPDARQAHRQTHAKP
LLDELHTWLTAMLGTLSRKSDTSQAILYALNRWAALTRYCDDGHLEIDNLPAERALRSVAVGRRNYLFAGADSGGERAAA
IYSLIGSAKLNGIDPEAYLRHVLGRIADHPINRSDELLPWRVTVLAS

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
BCAM0248 YP_002232880.1 putative transposase Not tested BcenGI11 Protein 9e-147 65
st57 CAC81895.1 ST57 protein Not tested LEE II Protein 4e-126 58
Z1570 NP_287074.1 hypothetical protein Not tested TAI Protein 8e-132 57
Z4337 NP_289562.1 hypothetical protein Not tested OI-122 Protein 1e-132 57
Z5098 NP_290249.1 prophage-associated protein Not tested LEE Protein 1e-132 57
tnp AEA34686.1 transposase Not tested Not named Protein 2e-132 57
ECs4547 NP_312574.1 hypothetical protein Not tested LEE Protein 6e-133 57
unnamed CAC39285.1 hypothetical protein Not tested LPA Protein 1e-132 57
unnamed AAC31494.1 L0015 Not tested LEE Protein 1e-132 57
unnamed ACU09439.1 IS66 family element transposase Not tested LEE Protein 4e-133 57
Z1131 NP_286666.1 hypothetical protein Not tested TAI Protein 8e-132 57
unnamed CAI43806.1 hypothetical protein Not tested LEE Protein 3e-132 57
unnamed AAL57570.1 unknown Not tested LEE Protein 8e-133 57
Z4340 NP_289564.1 hypothetical protein Not tested OI-122 Protein 8e-118 55
aec53 AAW51736.1 Aec53 Not tested AGI-3 Protein 5e-123 53
Z1161 NP_286696.1 hypothetical protein Not tested TAI Protein 3e-122 51
Z1600 NP_287104.1 hypothetical protein Not tested TAI Protein 3e-122 51
unnamed AAL08460.1 unknown Not tested SRL Protein 6e-105 49
ECO103_3554 YP_003223421.1 hypothetical protein Not tested LEE Protein 6e-109 49
Z4317 NP_289543.1 hypothetical protein Not tested OI-122 Protein 6e-109 49
tnp AEA34687.1 IS66 family transposase Not tested Not named Protein 5e-88 47
RL059 AAP84184.1 transposase Not tested PAPI-1 Protein 4e-85 42
tnpC AEZ06051.1 transposase Not tested Tn6167 Protein 4e-80 42

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
GEM_3062 YP_006617152.1 transposase VFG0793 Protein 6e-133 57
GEM_3062 YP_006617152.1 transposase VFG1051 Protein 3e-105 49
GEM_3062 YP_006617152.1 transposase VFG1736 Protein 5e-97 48