Gene Information

Name : GEM_3061 (GEM_3061)
Accession : YP_006617151.1
Strain :
Genome accession: NC_018513
Putative virulence/resistance : Unknown
Product : transposase
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 3346810 - 3347157 bp
Length : 348 bp
Strand : +
Note : -

DNA sequence :
ATGATCGGCCTGCCCAGCCACACACGCGTCTGGCTGGCCGCTGGTGTGACCGACATGCGCTCGGGCTTCAACAGCTTAGC
CGCAAAGGTTCAGACCGTGCTGGAGCGGGACCCGTTCAGCGGCCACGTATTCGTGTTCCGGGGCCGGCGTGGCGACCTGG
TCAAGGTGCTGTGGTGGAGCGGCGACGGCATGTGCCTGCTGATGAAACGCCTGGAACGAGGCCGCTTCGTCTGGCCGCGG
GCCGATGGTGGCGTGATCTATCTGAGCCAGGCCCAGCTGTCGATGCTGCTCGAAGGCATCGACTGGCGGCAGCCGGTCCG
CACGACCGAACCGAGTTCGGCGTTGTAA

Protein sequence :
MIGLPSHTRVWLAAGVTDMRSGFNSLAAKVQTVLERDPFSGHVFVFRGRRGDLVKVLWWSGDGMCLLMKRLERGRFVWPR
ADGGVIYLSQAQLSMLLEGIDWRQPVRTTEPSSAL

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
BCAM0247 YP_002232879.1 putative transposase Not tested BcenGI11 Protein 3e-39 76
unnamed AAL99258.1 unknown Not tested LEE Protein 4e-35 72
unnamed ACU09438.1 IS66 family element orf2 Not tested LEE Protein 4e-35 72
c3578 NP_755453.1 hypothetical protein Not tested PAI I CFT073 Protein 5e-35 72
Z4336 NP_289561.1 hypothetical protein Not tested OI-122 Protein 5e-35 72
unnamed AAC31493.1 L0014 Not tested LEE Protein 4e-35 72
Z5097 NP_290248.1 prophage-associated protein Not tested LEE Protein 5e-35 72
hp4 AAC61716.1 Hp4 Not tested PAI I CFT073 Protein 4e-35 72
ECs4546 NP_312573.1 hypothetical protein Not tested LEE Protein 5e-35 72
Z1132 NP_286667.1 hypothetical protein Not tested TAI Protein 3e-34 71
Z1571 NP_287075.1 hypothetical protein Not tested TAI Protein 3e-34 71
c3561 NP_755436.1 hypothetical protein Not tested PAI I CFT073 Protein 1e-34 71
ECUMN_3327 YP_002414007.1 putative transposase ORF2, IS66 family Not tested Not named Protein 1e-34 71
unnamed AAL08461.1 unknown Not tested SRL Protein 8e-35 70
l0014 CAD33776.1 L0014 protein Not tested PAI I 536 Protein 6e-27 68
pB171ORF50 CAD66190.1 ORF50 protein of pB171 Not tested PAI III 536 Protein 9e-35 65
aec52 AAW51735.1 Aec52 Not tested AGI-3 Protein 8e-35 65
unnamed ADD91739.1 hypothetical protein Not tested PAI-I AL862 Protein 8e-35 65
ECO103_3553 YP_003223420.1 hypothetical protein Not tested LEE Protein 8e-33 63
Z4316 NP_289542.1 hypothetical protein Not tested OI-122 Protein 8e-33 63
ECO103_3567 YP_003223430.1 hypothetical protein Not tested LEE Protein 6e-30 60
Z4338 NP_289563.1 hypothetical protein Not tested OI-122 Protein 6e-30 60
Z1160 NP_286695.1 hypothetical protein Not tested TAI Protein 5e-31 60
Z1599 NP_287103.1 hypothetical protein Not tested TAI Protein 5e-31 60
ECUMN_3364 YP_002414037.1 putative transposase ORF2, IS66 family Not tested Not named Protein 5e-31 60

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
GEM_3061 YP_006617151.1 transposase VFG1709 Protein 2e-35 72
GEM_3061 YP_006617151.1 transposase VFG0792 Protein 2e-35 72
GEM_3061 YP_006617151.1 transposase VFG1698 Protein 3e-35 71
GEM_3061 YP_006617151.1 transposase VFG1052 Protein 3e-35 70
GEM_3061 YP_006617151.1 transposase VFG1517 Protein 2e-27 68
GEM_3061 YP_006617151.1 transposase VFG1665 Protein 4e-35 65
GEM_3061 YP_006617151.1 transposase VFG1737 Protein 1e-31 60