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Name : GEM_2942 (GEM_2942) Accession : YP_006617033.1 Strain : Genome accession: NC_018513 Putative virulence/resistance : Virulence Product : type II secretion system protein E Function : - COG functional category : - COG ID : - EC number : 3.6.1.15 Position : 3217499 - 3218776 bp Length : 1278 bp Strand : + Note : - DNA sequence : ATGCATTTCCCTGCTCCCGGGGCGCCGCTGCATGCGCAGCGGCCGCCCGTCCCGTCCGACGCGTCGCCCGCCGACGCGCC CCGCCCGCTCGATGCGACGCAACTCGACGATTCACCCGCCGTACGGCTGCTGACCGACACGCTTCATGCCGCACGCGTGC GCGACGCATCCGACGTCCACGTCGAACCCTTCGAAGCCGGCTGGCGCATCCGCCTGCGCATCGACGGCATGCTGCACGAA CACGCGCGACCGCCCGCTCATCTGCGCGACGCGCTCGTGACGCGGATCAAGGTGCTGTCACGCATGGACATCGCCGAACG CCGGCTCCCGCAGGACGGCCGGCTGCGCATCGCGGTCGACGGCGGCATGCGCGGCGACTACCGGGTCAGCTCGCTGCCCA CGCTGTTCGGCGAGAAGCTCGTGCTGCGCCGCCTCGAAACGCTGCCGCCCGACCTCACGCTCGCGCGACTCGGCTTCGAC GCGCGGCAAGCCGCCGCGATGGAGGCCGCGATACGCGCACCGCACGGTCTCGTGCTCGTCACCGGCCCGACCGGCAGCGG CAAGACGCTGTCGCTCTACTGCGCGCTGCAGATGCTCGACCGCGACGCGCATAACGTATGCACGGTCGAGGATCCGGCCG AGATTCAGCTCGACGGAATCAACCAGGTCGGCGTCGCCGAAAAGGCCGGGCTCACCTTCGCCACCGCGCTGCGCGCGCTG CTGCGGCAGGATCCGGACGTCATCATGGTCGGCGAGATTCGTGATGCGGAGACGGCCGACGTCGCGATCAAGGCCGCGCA GACGGGCCACCTCGTGCTGTCGACGCTGCACACGAACGACGCGCCGGCCGCCGTCGCGCGACTGCTCGACATCGGCGTCG CACCGTACAACCTCGCGGCCGCGTTGCGCCTCGTCACCGCGCAACGCCTCGTTCGACGCCTGTGCACCGCATGTCGAGCG CATTCGGACGCGCCGCTGCGCGTGCTGCGCGAATCCGGCTGCGATACGGCAGCCCTGGAGGCCGGATGGCGCCCGTTCGT CGCACGCGGCTGTGCCGCCTGTCACGGCATCGGTTATCGAGGCCGGATCGGCCTGCATCAGACGATGCCGGTTTCATCGG AGATGGCGGAGCGCATCGTCGCGCGCGCAAGCGTTGGTGCACTCGCGCAACGCGCGGCGGCCGAGGGCGTGCGCAATCTG CGCGCCGCGGCACTCGCGCATGTTCGCGACGGCACGACGAGCGTGGCGGAAGCGCTGGCCGCGACGCCGGACGCGTGA Protein sequence : MHFPAPGAPLHAQRPPVPSDASPADAPRPLDATQLDDSPAVRLLTDTLHAARVRDASDVHVEPFEAGWRIRLRIDGMLHE HARPPAHLRDALVTRIKVLSRMDIAERRLPQDGRLRIAVDGGMRGDYRVSSLPTLFGEKLVLRRLETLPPDLTLARLGFD ARQAAAMEAAIRAPHGLVLVTGPTGSGKTLSLYCALQMLDRDAHNVCTVEDPAEIQLDGINQVGVAEKAGLTFATALRAL LRQDPDVIMVGEIRDAETADVAIKAAQTGHLVLSTLHTNDAPAAVARLLDIGVAPYNLAAALRLVTAQRLVRRLCTACRA HSDAPLRVLRESGCDTAALEAGWRPFVARGCAACHGIGYRGRIGLHQTMPVSSEMAERIVARASVGALAQRAAAEGVRNL RAAALAHVRDGTTSVAEALAATPDA |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| gspE | YP_854406.1 | type II secretion protein GspE | Not tested | PAI I APEC-O1 | Protein | 9e-66 | 45 |
| gspE | CAE85233.1 | GspE, hypothetical type II secretion protein | Not tested | PAI V 536 | Protein | 7e-66 | 45 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| GEM_2942 | YP_006617033.1 | type II secretion system protein E | VFG2426 | Protein | 3e-127 | 78 |
| GEM_2942 | YP_006617033.1 | type II secretion system protein E | VFG0233 | Protein | 7e-87 | 50 |
| GEM_2942 | YP_006617033.1 | type II secretion system protein E | VFG0182 | Protein | 7e-65 | 46 |
| GEM_2942 | YP_006617033.1 | type II secretion system protein E | VFG2048 | Protein | 1e-65 | 44 |
| GEM_2942 | YP_006617033.1 | type II secretion system protein E | VFG1876 | Protein | 7e-60 | 41 |
