Gene Information

Name : GEM_2755 (GEM_2755)
Accession : YP_006616847.1
Strain :
Genome accession: NC_018513
Putative virulence/resistance : Virulence
Product : polysaccharide export protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 3010401 - 3011924 bp
Length : 1524 bp
Strand : -
Note : -

DNA sequence :
ATGGCGCCGGGGTCGGGCGATGTATCGGTCATGCCGCAGGCGCCGAACAACATGTTCGGTTCGCAGTTGTTCGGCGGCAC
CTTCCACAACAGTCGAGGTTCGGGCTTCAATCCCGGGTATCAGGTCAGCATCGGCGATACGGTCACACTGCGCATGTGGG
GTGCATTCGCCTTCGACGGTCAGTTGATCGTCGATCCGCAGGGCAACATCTTCGTGCCTAACGTCGGCCCGGTTACCGTT
GCTGGCGTGCGCAATGCGGAGCTGAACGGGCGCGTGCTTGCCGAGGTGCGCAGGGTCTACAAGGCGAACGTGAACGTCTA
TGCGAGCCTCGACGTTGCGCAGCCGGTCAAGGTGTATGTCACGGGATACGTCAAGCAGCCGGGTATGTACGGCGGCATCG
CGTCCGAGAGCATCCTGTCCTATATCGACAAGGCCGGTGGTGTCGACGTCGAGCGCGGCAGCTACGTCGACGTGACGGTC
AAGCGCGGTGGCGCCGTGCGCAAGCACTTCAACCTCTACGACTTTCTGCTCAACGGCGTCATCGACCAACTCCAGTTGGC
GGACGGCGACGTCATCGTCGTGGGGCCGCGCGAGCACGTCTTCTCGGTGCGCGGCGAGGTGTACAACGCATACGATTTCG
AGTTCGGCGCACCGGTCATTTCGCTGCAGCAGGCGCTCGCCATCGCGCGGCCCAAGCCTGGAGCGACGCACGTCAGCATC
GTGCGCCGCCAGGGTAGCAAAAGAACGAGCGAGTACTACCCGATTGCCGACGCAACGAATGTGAAGTTAAACGACGGCGA
TCAACTGGTCGTTACCGCGGATCGTTACGCCGGCACGATTCAGGTTCGAGTCGAGGGGGCTCATTCCGGCGAGCACGCGC
TGGTGTTGCCTTACGGCGCGACGATGGCGCAGGTTCTCGGTCAGATCAGGGCAAATCCGTTGTCGCGCGTCGACGAGGTC
CAGTTGTTCCGCAAGTCGGTTGCCGATCGGCAGAAGGAAATGCTGGCCGTCGAACTCCAGAAGCTGCAGGAGGCCGCGCT
GTCGGCTCCTTCCGCGACGAGCGAGGAAGCGAACTTGCGCGCGAAGGAAGCCGAGGGCATTACCAAATTCGCCGCGCTGG
CCAGCAAAACCGAGTTCAAGGGGCAGGTCGTTCTCAACGAAAAGACGATGAGCGACGTGATTCTCGAGGACGGGGATGTC
ATCAATATTCCCGAGCGTACGAGCGTTGTCATGGTGCATGGAGAGGTGCTCTTCCCGAATGCCGTCGAGTGGCAATCGGG
CATGACGGCAGACGACTACATTTCGCACGTCGGCGGATATACGCAGAAGGCGGACAACAGCAAGATCGTCGTGATTCATC
AGAACGGCAAGGCAGAGCTCGCGGAGAGTGGTACGAAGATTGCTTCAGGTGACGAGTTGATGGTGTTGCCGAAGGTGAAA
TCGAAGAATATCGAGATCACCCGAGGAATTACTCAAATCCTGTATCAAATGGCCGTTGCGGCGAGGGTGATCTTCTTCTG
GTAA

Protein sequence :
MAPGSGDVSVMPQAPNNMFGSQLFGGTFHNSRGSGFNPGYQVSIGDTVTLRMWGAFAFDGQLIVDPQGNIFVPNVGPVTV
AGVRNAELNGRVLAEVRRVYKANVNVYASLDVAQPVKVYVTGYVKQPGMYGGIASESILSYIDKAGGVDVERGSYVDVTV
KRGGAVRKHFNLYDFLLNGVIDQLQLADGDVIVVGPREHVFSVRGEVYNAYDFEFGAPVISLQQALAIARPKPGATHVSI
VRRQGSKRTSEYYPIADATNVKLNDGDQLVVTADRYAGTIQVRVEGAHSGEHALVLPYGATMAQVLGQIRANPLSRVDEV
QLFRKSVADRQKEMLAVELQKLQEAALSAPSATSEEANLRAKEAEGITKFAALASKTEFKGQVVLNEKTMSDVILEDGDV
INIPERTSVVMVHGEVLFPNAVEWQSGMTADDYISHVGGYTQKADNSKIVVIHQNGKAELAESGTKIASGDELMVLPKVK
SKNIEITRGITQILYQMAVAARVIFFW

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
kpsD YP_854331.1 polysialic acid transport protein KpsD precursor Not tested PAI I APEC-O1 Protein 8e-154 62
kpsD CAE85212.1 KpsD protein Virulence PAI V 536 Protein 7e-154 62
kpsD AAZ04468.1 polysialic acid transport protein precursor Virulence PAI I APEC-O1 Protein 6e-154 62

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
GEM_2755 YP_006616847.1 polysaccharide export protein VFG1448 Protein 3e-154 62