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Name : GEM_2747 (GEM_2747) Accession : YP_006616839.1 Strain : Genome accession: NC_018513 Putative virulence/resistance : Virulence Product : capsular polysaccharide biosynthesis protein Function : - COG functional category : - COG ID : - EC number : - Position : 2995290 - 2997491 bp Length : 2202 bp Strand : - Note : - DNA sequence : GTGAGCGGGCGCGGGGAGTGGGGCGTTCCGGTCTGGAGCGTCGGGCTATGGACGCTCCGCCGATCCGTCCTGCTGGATGC GCGGGTGAAACTGTGCTGGCCCTGGCAGGTCGGGCGGGCAACCGGCTTCCTTGGGTGGGGGAAACGGGAAAGCGGGGCGC GTGCGGAGCGCTGGGCCGAGGCCGCCGGGGTGCGAACGTTGCGACTCGAAGACGGCTTCCTCCGCTCCGTCTCCCTCGGC GTACTCGGCGACACTGCCCTGTCGATCGTCATCGACGATCTCGGCATCTACTACGACGCCAGTCGGCCGTCCCGTCTTGA GATGCTCGTGAAGGACGTCGCCACGCCGGACGGTGAGCGTGGCGATGCATCGCGGAACGAAGCTGACCGCGCGATGTCCC TGATCGTCCGCCACGGCCTGTCCAAATACAACCACGCGCCCGACTTCGTCCCGCCCGACGACTGGCGCGATGACGCGATC CTGGTCATCGACCAGACCCGCGGGGATGTCGCTGTCCGCCTGGGCGGTGCCGACGAATCGTCGTTCCGCGAGATGCTTGC CGCTGCGCTTGCCGAAAACCCGGGCAAACCGGTCTGGATCAAGACGCATCCCGACGTGATGTGCGGCAAGAAGGCCGGTT ATCTCGTTGACGCGTCATTCAGCGATCCGCGCGTGCGTCTGCTGCCGGTCGACGTCAGTCCGCCATCGCTACTGAAGCGG GTGGGCAAGGTGTACGCGGTTTCATCGCAAATGGGCTTCGAGGCGCAGCTGTGCGGCAAGCCGGTCGTGACGTTCGGCTT GCCGTGGTACGCCGGCTGGGGGCTCACCGACGATCGTCATGCGGACGCACCGATCGTTGCCGGTCGTCGCGGTAGCGCGA CGCTGCACCAGTTGTTCGACGCGGCGTACCTGCGCTATTGCCGTTACATCGATCCCGAAACCGGCAGCCGCGGCACGATC TTCGACGTGATTGCCCATCTCGCGAAGCAACGCCGGCTCAACGAGGTGACGAGAGGCGAACTCGTGTGCGTCGGGCTGAG CCTGTGGAAGCGCAGCGTGGTGGCGCCATTTTTGCGGCACGGCGGCGCGCGCGTGCGTTTCGTCGACTCGCCGGGGGCGT TGCGGCGCCTGCCGCCCGACGCGTCGCGGCGCGTCGTGTTATGGGGCGCCCGGCGTCCCGACGTCGCTGCGGTTGCGCAG GAACTGGGCTTGCCCGTGCTCCGCATGGAGGACGGGTTCATCCGGTCCGTCGGTCTGGGCTCGAACCTGATCGCGCCGCT TTCGCTCGTGATCGACGATCTCGGCATCTATTTCGATCCGCGTACACCCTCTCGGCTAGAGGCAATCCTCGAACGAGGCG GCTTCGACGATGCAGAGCTCGCGGAGGCCCGTAGCGTGCGCGCGGCGCTCGTCGACGCACGCATCGGCAAGTACAACGTC GGCAATGGCGGCGTTGCGTTGCCGTCGCCGCGCCCGGCGAAAGTGATTCTGGTGCCGGGGCAGGTCGAGGATGATGCATC GATCCGGACCGGCTCGTCGTGGATTTCGACGAATCTCGGCTTGCTGTCGAGCGTGCGTGCCGCTCATCCTGACGCATTCG TTATTTTCAAGCCGCATCCGGATGTCGTCAGCGGCAATCGCGCGGGTGCAGTGCCACTGCACGAAGCCCGGCGACTCGCC GACGTCGTGGCGCCCGAGTCCGACGTGATCGCGTGCGTCGAGCAGGCCGACGAAGTGCATACGATGACGTCGTTGACCGG TTTCGAGGCGCTGCTGCGCGGCAAGCGGGTCGTCTGCTACGGTGCGCCGTTCTATGCCGGCTGGGGGTTGACGCACGACG TCTTCGCGAACGCATCGTCGGGCACCGGGCACGCGACGGACGCCAGCGATACGCCGGACGGCCATCCGGTCTGGTCGCGC CGTTGTCGCCGGTTGGCGCTTGACGAACTGATTGCCGGGACGCTGCTGCGCTATCCGCGTTATGTCCATCCGGTTTCCCG CGCCGTGATCGACGCGCAACACGCCATCACCTTGCTGCACGCGCAGCGACAGTCGACCGGGCAGGGCAAGCTGAAGCGAA ATCGGCTTAAGCAGCAGTGCGGGAAAGTCAAGATGTGGGCGCTGACGACTTACGCGGAATATCGGATTTCGGTGCGCAAG AAGCTTTACCTGTCGCTGCAGCGGTGGCTCGCGAAGCTTTAG Protein sequence : MSGRGEWGVPVWSVGLWTLRRSVLLDARVKLCWPWQVGRATGFLGWGKRESGARAERWAEAAGVRTLRLEDGFLRSVSLG VLGDTALSIVIDDLGIYYDASRPSRLEMLVKDVATPDGERGDASRNEADRAMSLIVRHGLSKYNHAPDFVPPDDWRDDAI LVIDQTRGDVAVRLGGADESSFREMLAAALAENPGKPVWIKTHPDVMCGKKAGYLVDASFSDPRVRLLPVDVSPPSLLKR VGKVYAVSSQMGFEAQLCGKPVVTFGLPWYAGWGLTDDRHADAPIVAGRRGSATLHQLFDAAYLRYCRYIDPETGSRGTI FDVIAHLAKQRRLNEVTRGELVCVGLSLWKRSVVAPFLRHGGARVRFVDSPGALRRLPPDASRRVVLWGARRPDVAAVAQ ELGLPVLRMEDGFIRSVGLGSNLIAPLSLVIDDLGIYFDPRTPSRLEAILERGGFDDAELAEARSVRAALVDARIGKYNV GNGGVALPSPRPAKVILVPGQVEDDASIRTGSSWISTNLGLLSSVRAAHPDAFVIFKPHPDVVSGNRAGAVPLHEARRLA DVVAPESDVIACVEQADEVHTMTSLTGFEALLRGKRVVCYGAPFYAGWGLTHDVFANASSGTGHATDASDTPDGHPVWSR RCRRLALDELIAGTLLRYPRYVHPVSRAVIDAQHAITLLHAQRQSTGQGKLKRNRLKQQCGKVKMWALTTYAEYRISVRK KLYLSLQRWLAKL |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| lipA | NP_273145.1 | capsule polysaccharide modification protein | Not tested | IHT-A | Protein | 9e-150 | 50 |
| kpsC | AAZ04470.1 | capsule polysaccharide export protein | Virulence | PAI I APEC-O1 | Protein | 3e-122 | 46 |
| kpsC | YP_854335.1 | capsule polysaccharide export protein KpsC | Not tested | PAI I APEC-O1 | Protein | 4e-122 | 46 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| GEM_2747 | YP_006616839.1 | capsular polysaccharide biosynthesis protein | VFG0704 | Protein | 2e-136 | 50 |
| GEM_2747 | YP_006616839.1 | capsular polysaccharide biosynthesis protein | VFG0259 | Protein | 4e-150 | 50 |
| GEM_2747 | YP_006616839.1 | capsular polysaccharide biosynthesis protein | VFG0692 | Protein | 4e-144 | 49 |
