Gene Information

Name : GEM_0247 (GEM_0247)
Accession : YP_006614396.1
Strain :
Genome accession: NC_018513
Putative virulence/resistance : Unknown
Product : transposase
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 272942 - 273703 bp
Length : 762 bp
Strand : -
Note : -

DNA sequence :
GTGCTGCATTACGACGCGAAGCCGGACCACGAGAATGAGGTGCTAGCGGCGCGTCTGGTGGAGTTGGCGCACGAACGTCG
TCGATTCGGCTACCGCCGACTGCACGCCCTGGTGGAACGCGAAGGCACGCACGCCAATCACAAGCGCATCTATCGTCTGT
ACCGTGAGGCAGGGCTGGCTGTGCGGCGCCGTCGCAAGCGCCACGGCGTCATGATTGAGCGCGAGCAACTGGCATTGCCG
GGCGCGCCCAACGAGGTGTGGTCAATCGATTTCGTGATGGATGCGCTTTCCAACGGCCGGCGCGTGAAGTGCCTGACCGT
CGTCGACGACTTCACGAAAGAGGCTGTCGACATCGTCGTCGACCATGGCATCTCAGGTTTGTATGTCGCTCGGGCATTGG
ACCGTGCAGCTCGCTTCCGTGGCTATCCCAAGGCCGTGCGAACAGACCAGGGCCCCGAATTTACGAGCCGCGCGCTTGAC
CAGTGGGCGTATGCGAACGGCGTCACGCTGAAGTTGATTCAGGCGGGCAAGCCAACGCAGAATGCGTACATCGAGTCGTT
CAACGGCAAGTTCCGCGACGAATGCCTTAACGAGCACTGGTTCACGACGCTTGCACACGCTCGGGCTGTCATCGCGGCAT
GGCGTCAGGACTACAACGAGCAAAGGCCGCACAGCGCATTGAACTACCTTGCGCCGTCAGAGTTTGCGGCGAAACATCGG
GCAACCGCGGATGCTCCTGCCGCTTTCCAGGAGTTGGTTTAA

Protein sequence :
MLHYDAKPDHENEVLAARLVELAHERRRFGYRRLHALVEREGTHANHKRIYRLYREAGLAVRRRRKRHGVMIEREQLALP
GAPNEVWSIDFVMDALSNGRRVKCLTVVDDFTKEAVDIVVDHGISGLYVARALDRAARFRGYPKAVRTDQGPEFTSRALD
QWAYANGVTLKLIQAGKPTQNAYIESFNGKFRDECLNEHWFTTLAHARAVIAAWRQDYNEQRPHSALNYLAPSEFAAKHR
ATADAPAAFQELV

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed ABR13352.1 insertion sequence IS407 OrfB Not tested PAGI-5 Protein 1e-73 75
unnamed ABR13540.1 insertion sequence IS407 OrfB Not tested PAGI-8 Protein 2e-87 72
EXB25 ABD94712.1 hypothetical protein Not tested ExoU island B Protein 2e-54 66
trp1400B CAB46580.1 IS1400 transposase B Not tested HPI Protein 2e-40 43
XCV0439 YP_362170.1 ISRSO12 transposase (fragment) Not tested Hrp PAI Protein 7e-43 43