Gene Information

Name : GEM_2233 (GEM_2233)
Accession : YP_006616340.1
Strain :
Genome accession: NC_018513
Putative virulence/resistance : Resistance
Product : SSS family APC transporter
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 2439621 - 2441297 bp
Length : 1677 bp
Strand : -
Note : -

DNA sequence :
ATGAAATCGAGCGCACGCGTTTCGATCGCGGCATGCGCGCTTGCCGCCACGCCGGGCGGCCTTGCCTGGGCTGGCCCGGT
CGTGGAGGCGGGGCAGCGTCAGCCGCTCAATCTGGCCGCCATCGCAATGTTCATGGTGTTCGTCGGCATGACGCTGGGCA
TCACGTACTGGGCGGCGCGCCGCACCAGGACGGTGAACGACTTCCTCACCGCCGGCGGCGGCATCAGCGGGCTTCAGAAC
GGCCTTGCGGTCGCCGGCGACTACATGTCCGCCGCGACCTTGCTCGGCGTCGTGAGCCTTGTCTACGCGAAAGGCTACGA
TGGCCTGCTCTATGTCGTCGGCTTCTTCGTGGGCTGGCCGGTGATGCTGTTCCTCATGGCCGAGCGGCTGCGCAATCTCG
GCCGGTTCACGTTCGTCGACATCATCGCCTACCGGCTCGATCCGGTCAGCACGCGCTGGATGGGCGTGGTCAGTTCGCTG
ACGGTGGTGTTTTTCTATCTGATCGTCCAGATGGTCGGCGCGGGAGAACTAGTTCAACTGCTGTTCGGCATCGACTACAC
CTATGCGGTCGTCGGCGTCGGGTGTCTGATGATCGTCTACGTGACCTTCGGCGGGATGATCGCGACGACGTGGGTCCAGA
TCATCAAGGCCGTCCTGCTGATGTTCGGCGGCACGTTGCTGACGCTCCTGGCGCTCGGTCACTTCGGGTTCAGCTTCGAA
CGGCTTGCAAGGTCGGCGATCTCGGTGCACAAGGCGGGGAACTCGCTGATGGAGCCGGGCCGCCTGTTCTCGGATCCCGT
TTCGGCCGTCTCGATGTCGCTCGCGACGGTGTTCGGACTCTCCGGACTGCCGCACGTCCTGATGCGCTTCTTTACCGTTC
CGAATGCACGGGAAGCCAGAAAGAGCGTATTCGTTGCAAGCACGTGCATCGGCTTCATGTTCATTGCGATGTTCGTCATC
GGCCTCGCGAGCGTCGTGATCGTCGGCACCGACCCGCAGTTCTTCGAGGGCGGACGCGTGGGCGGCGTGCTGCGCGGCGG
GAGCAATATGGTGGCGATGCATCTCGCCGACGCGACGGGCGGCAGCCTGTTCCTCGGATTCCTCGCGGCGGTGACGTTCG
CCACCATCCTGGCCGTGGTGTCGGGCCTGGTATTGGCGGGTGCGTCGGCCGTATCGCACGATCTCTATGCGAGCGTGCTG
TGCAAGGGGCGAGCCAGCGGGGCAGCGGAGATTCGCGTCACGCGGTGGACGACGCTGGCGATCGGCGCCGTGGCCGTCGC
GCTTGGCCTGCTGTTCAAAGGGCAGAATCTCGCTTTTCTCGTCGCGCTAGCGTTCAACGTTGCCGCGTCGGCGAACTTCC
CGCCGCTCGTGCTTTCGATGTACTGGAAGGGATTGACGAGCCGCGGTGCCGTCTGCGGCGGCATCGTCGGGCTCGTATCG
TCGGTGTCGCTGGTCATTCTGTCGCCGGCCGTGTGGAAGTCGGTGCTCGGGCATCCGGCTGCCGTGTTCCCGTACGATCA
TCCGGCGTTGTTTACGATGCCGCTGGCGTTCCTGGCGAGCTACCTGATGTCGACACTCGACCGGAGTTCGAAGGCCGACG
CGGAACGGCGTGCGTTCGACGCCCAGTTCGTCCGCGCTCAGACCGGACTCGGTGCGGAACGAGCGGTCGAGCATTGA

Protein sequence :
MKSSARVSIAACALAATPGGLAWAGPVVEAGQRQPLNLAAIAMFMVFVGMTLGITYWAARRTRTVNDFLTAGGGISGLQN
GLAVAGDYMSAATLLGVVSLVYAKGYDGLLYVVGFFVGWPVMLFLMAERLRNLGRFTFVDIIAYRLDPVSTRWMGVVSSL
TVVFFYLIVQMVGAGELVQLLFGIDYTYAVVGVGCLMIVYVTFGGMIATTWVQIIKAVLLMFGGTLLTLLALGHFGFSFE
RLARSAISVHKAGNSLMEPGRLFSDPVSAVSMSLATVFGLSGLPHVLMRFFTVPNAREARKSVFVASTCIGFMFIAMFVI
GLASVVIVGTDPQFFEGGRVGGVLRGGSNMVAMHLADATGGSLFLGFLAAVTFATILAVVSGLVLAGASAVSHDLYASVL
CKGRASGAAEIRVTRWTTLAIGAVAVALGLLFKGQNLAFLVALAFNVAASANFPPLVLSMYWKGLTSRGAVCGGIVGLVS
SVSLVILSPAVWKSVLGHPAAVFPYDHPALFTMPLAFLASYLMSTLDRSSKADAERRAFDAQFVRAQTGLGAERAVEH

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed AAK01502.1 putative amino acid transport protein Not tested PAGI-1 Protein 9e-129 62

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
GEM_2233 YP_006616340.1 SSS family APC transporter BAC0564 Protein 7e-117 56
GEM_2233 YP_006616340.1 SSS family APC transporter BAC0570 Protein 1e-111 56