Gene Information

Name : GEM_1781 (GEM_1781)
Accession : YP_006615900.1
Strain :
Genome accession: NC_018513
Putative virulence/resistance : Virulence
Product : ABC transporter-like protein
Function : -
COG functional category : -
COG ID : -
EC number : 3.6.1.3
Position : 1939545 - 1940417 bp
Length : 873 bp
Strand : -
Note : -

DNA sequence : 
ATGACGCGTAGTACCGCCGCGCTTGCCGCGCGCGGGCTGACAGTGGGTTATCGCGACCATGTCGTGATCGACGGGCTGAA
CCTGTCGATCGCGGCCGGTCGCGTCACGGCGCTGTGCGGGCCGAACGGCTGCGGCAAGAGCACGCTGCTGCGCACGCTCG
CGGGCCTGCAGCCCGCGCGTGCGGGCCAGGTCGACGTGAACGGCAAGCCGCTCGCGTCGTTTCGCCGTCGCACGCTCGCG
CGCGAGCTGACCATGCTCGCGCAGTTCAACCAGATTCCGTCGGGGCTGACCGTGCGCGAGCTGGTCGCGTACGGGCGCTA
CGCGTACGGCGGCTTCCTGCGCGGGCTGTCGCGCGCCGATCATGCGGCGATCGACGAGGCGCTCGACACGAGCGGCCTCG
CCGGCGACGCCGAGCGCGACGTCGGCGCGCTGTCGGGCGGCGAGCGGCAGCGTGCTTGGATCGCGATGGCGCTCGCGCAG
CAGGCGCCGATCGTGCTGCTCGACGAGCCGACGACCTATCTCGACATCCATCACCAGCTCGACATCCTCGACGCGCTGCG
CGCGCTGAACCGCGCGCGCGGGCTGACGATCGTGTGGGTTCTGCACGACCTGAACCAGGCGGCTGCGTACAGCGACGACA
TCGTGCTGATGCGTGCCGGCCGCCTCGTTGCGCAGGGCTCGCCCGACGCGATGCTGGAGCCGGCGTGCTTGCGCGCGGCG
TTCGGCGTCGACATGCTGAAGCTCGCGCACCCGCAGACCGGCGCGCCGATGTGCGTGCCGGCCTACGGGCCGCCGCCGTC
CGGCGCGTCGCACGCGGCGGGCACGTTCGACCGCGCAGTTGACCCCGCAGTTGACCGGAATCTCGCCGTATGA

Protein sequence : 
MTRSTAALAARGLTVGYRDHVVIDGLNLSIAAGRVTALCGPNGCGKSTLLRTLAGLQPARAGQVDVNGKPLASFRRRTLA
RELTMLAQFNQIPSGLTVRELVAYGRYAYGGFLRGLSRADHAAIDEALDTSGLAGDAERDVGALSGGERQRAWIAMALAQ
QAPIVLLDEPTTYLDIHHQLDILDALRALNRARGLTIVWVLHDLNQAAAYSDDIVLMRAGRLVAQGSPDAMLEPACLRAA
FGVDMLKLAHPQTGAPMCVPAYGPPPSGASHAAGTFDRAVDPAVDRNLAV

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
iusE YP_005143742.1 iron ABC transporter ATP-binding protein Virulence Not named Protein 5e-53 46
fecE AAL08451.1 ATP-binding protein FecE Virulence SRL Protein 1e-46 45
DIP0585 NP_938961.1 iron ABC transporter ATP-binding protein Virulence Not named Protein 3e-50 44
ciuD YP_005681255.1 Iron ABC transporter ATP-binding protein Virulence PiCp 4 Protein 2e-54 44
ciuD YP_005683346.1 Iron ABC transporter ATP-binding protein Virulence PiCp 4 Protein 2e-54 44
ciuD YP_003783391.1 iron ABC transporter ATP-binding protein Virulence PiCp 4 Protein 2e-54 44
ciuD YP_005685432.1 Iron ABC transporter ATP-binding protein Virulence PiCp 4 Protein 2e-54 44

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
GEM_1781 YP_006615900.1 ABC transporter-like protein BAC0164 Protein 8e-47 45

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
GEM_1781 YP_006615900.1 ABC transporter-like protein VFG1042 Protein 7e-47 45
GEM_1781 YP_006615900.1 ABC transporter-like protein VFG0925 Protein 2e-48 44