Gene Information

Name : GEM_1628 (GEM_1628)
Accession : YP_006615747.1
Strain :
Genome accession: NC_018513
Putative virulence/resistance : Unknown
Product : RNA-binding S1 domain-containing protein
Function : -
COG functional category : -
COG ID : -
EC number : 2.7.7.8
Position : 1766186 - 1768510 bp
Length : 2325 bp
Strand : -
Note : -

DNA sequence :
ATGACGGAAACCGTAGCACTCAAGATCGTACAGCGCATCGCCACCGAACTGTCCGTCCAGCCGCGCCAGGTCGCGGCGGC
CGTGCAACTCCTCGACGAAGGCTCGACCGTTCCGTTCATTGCCCGGTACCGCAAGGAAGTGACCGGCAACCTGGACGACA
CGCAGCTGCGCCAGCTCGAGGAACGCCTCCTGTATCTGCGCGAGCTCGAGGATCGCCGTGCGACGATCCTGTCGAGCATC
GACGAACAGGGCAAGCTGACCGACGAACTGCGCACCGCGATCGAGGCGGCCGACAGCAAGCAGGTGCTCGAAGACCTTTA
TCTGCCGTACAAGCCGAAACGCCGCACGCGCGCGCAGATCGCCCGCGAAGCCGGCCTCGAGCCGCTCGCGCAGGCATTGC
TCGCGAATCCGCTGCTCGACCCGCAGACGGAAGCCGCCGCCTACGTCGATGCCGACAAGGGCGTCGCCGACGTGAAGGCC
GCGCTCGACGGCGCGCGCGACATCCTGTCCGAACAATTCGGCGAAACGGCCGAACTGCTCGGCAAGCTGCGCGACTATCT
GCACAGCCAGGGTGTCGTGTCGTCGGCCGTCGTCGAAGGCAAGGAAAACGAGGAAGGCGAGAAGTTCCGCGACTACTACG
ACTACGCGGAAACGATCCGGACCGTGCCGTCGCACCGCGCGCTCGCGCTGTTCCGCGGCCGCAATGCCGGCGTGCTGACC
GTCAAGCTCGGCCTCGGCGAGGAACTCGACGCACAGGTCCCGCATCCCGGCGAAGCGATGATCGCGCGCCATTTCGGGAT
CGCGAACCAGAGCCGCCCGGCCGACAAATGGCTGTCCGACGTGTGCCGCTGGTGCTGGCGCGTGAAGGTGCAGCCGCACA
TCGAGAACGAACTGCTCACGCAACTGCGTGAAACGGCCGAAGCCGAGGCGATCCGCGTGTTCGCCCGCAACCTGAAGGAC
CTGCTGCTGGCGGCGCCGGCCGGCCCGAAGGCCGTGATCGGCCTCGACCCCGGCCTGCGCACGGGCGTGAAGGTCGCCGT
CGTCGACCGCACCGGCAAGGTGCTGGCCACCGACACGATCTACCCGCACGAGCCGCGGCGCGACTGGGACGGCTCGCTCG
CGAAGCTCGCGCGCATCGCCGCGCAGACGCAGGCCGAGTTGATCAGCATCGGCAACGGCACCGCATCGCGCGAGACCGAC
AAGCTCGCGAGCGAACTGATCTCGAAGCACCCCGAACTGCGGCTGCAGAAGATCGTCGTGTCGGAAGCCGGCGCGTCCGT
CTACTCGGCGTCCGAGCTGGCCGCGAAGGAATTCCCGGAGCTCGACGTGTCGCTGCGCGGCGCGGTGTCGATCGCCCGCC
GCCTGCAGGACCCGCTCGCCGAGCTCGTGAAGATCGAGCCGAAAGCGATCGGCGTCGGCCAGTACCAGCACGACGTGAAC
CAGCGCGAACTCGCCCGCTCGCTCGACGCGGTGGTCGAGGATTGCGTGAACGCGGTCGGCGTCGATGCGAACACCGCGTC
GGTCGCGCTGCTCGCGCGCGTGTCGGGTCTGAACGCAACGCTCGCACGCAACATCGTCGACTACCGCGACGCGAACGGGC
CGTTTCCGTCGCGCGACCACCTGCGCAAGGTCCCGCGCCTCGGCGACAAGACCTTCGAGCAGGCGGCCGGCTTCCTGCGC
ATCAACGGCGGCGAGAATCCGCTCGACCGCTCGTCGGTGCACCCGGAAGCCTATCCGGTCGTCGAACGGATCCTCGCGAA
GATCAGCAAGCGGATCGACGACGTGCTCGGCAGCCGCGACGCGCTGTCCGGCCTGTCGCCGACGGAATTTGTTGACGAAC
GTTTCGGCCTGCCGACCGTGCGCGACATCCTGTCCGAACTCGAGAAGCCGGGCCGCGATCCGCGCCCCGAATTCAAGACC
GCAACGTTCCGCGACGGTGTGGAGAAGGTGTCCGATCTGATGCCGGGGATGCTGCTCGAAGGGGTCGTGACGAACGTCGC
CGCGTTCGGCGCGTTCGTGGATATCGGCGTGCACCAGGACGGCCTCGTCCACGTGTCGGCGATGTCGACGAAGTTCATCA
AAGACCCGCACGAGGTCGTAAAGGCCGGACAGGTCGTGAAGGTCAAGGTGCTCGACGTCGATGTGAAGCGCCAGCGCATT
GCGCTGACGATGCGCCTCGACGACGAAGCGGCAACGCCCGGCCTGGCGCCACGCGGCGGCCAGGATCGCGGCAATGCCGG
CCGCGGCGCGGCCCGCCCGCAGCGTTCGCGTGAGCCGGAACCGGCCGGCGCGATGGCCGCGGCGTTCGCGAAGCTGAAGC
GCTGA

Protein sequence :
MTETVALKIVQRIATELSVQPRQVAAAVQLLDEGSTVPFIARYRKEVTGNLDDTQLRQLEERLLYLRELEDRRATILSSI
DEQGKLTDELRTAIEAADSKQVLEDLYLPYKPKRRTRAQIAREAGLEPLAQALLANPLLDPQTEAAAYVDADKGVADVKA
ALDGARDILSEQFGETAELLGKLRDYLHSQGVVSSAVVEGKENEEGEKFRDYYDYAETIRTVPSHRALALFRGRNAGVLT
VKLGLGEELDAQVPHPGEAMIARHFGIANQSRPADKWLSDVCRWCWRVKVQPHIENELLTQLRETAEAEAIRVFARNLKD
LLLAAPAGPKAVIGLDPGLRTGVKVAVVDRTGKVLATDTIYPHEPRRDWDGSLAKLARIAAQTQAELISIGNGTASRETD
KLASELISKHPELRLQKIVVSEAGASVYSASELAAKEFPELDVSLRGAVSIARRLQDPLAELVKIEPKAIGVGQYQHDVN
QRELARSLDAVVEDCVNAVGVDANTASVALLARVSGLNATLARNIVDYRDANGPFPSRDHLRKVPRLGDKTFEQAAGFLR
INGGENPLDRSSVHPEAYPVVERILAKISKRIDDVLGSRDALSGLSPTEFVDERFGLPTVRDILSELEKPGRDPRPEFKT
ATFRDGVEKVSDLMPGMLLEGVVTNVAAFGAFVDIGVHQDGLVHVSAMSTKFIKDPHEVVKAGQVVKVKVLDVDVKRQRI
ALTMRLDDEAATPGLAPRGGQDRGNAGRGAARPQRSREPEPAGAMAAAFAKLKR

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
NMB0075 NP_273139.1 transcriptional accessory protein Tex Not tested IHT-A Protein 0.0 62