Gene Information

Name : GEM_1310 (GEM_1310)
Accession : YP_006615440.1
Strain :
Genome accession: NC_018513
Putative virulence/resistance : Virulence
Product : lysyl-tRNA synthetase
Function : -
COG functional category : -
COG ID : -
EC number : 6.1.1.6
Position : 1424658 - 1426184 bp
Length : 1527 bp
Strand : -
Note : -

DNA sequence :
ATGACCGAACCGACCCAAACGCAGCCCGCCGTCGCGGCGGACGAAAACCAGATCATCGCCGAGCGCCGCGAGAAGCTGCG
CGCCTTGCGCGAGCAAGGCATCGCCTATCCGAACGATTTCCGGCCGACGCATCACGCCGCCGATCTCCAGGTGAAATTCG
CCGACTCGGACAAGGCCGCGCTCGAAGCGAACCCGGTCGAGGTGTCGGTCGCCGGCCGCATGATGCTCAAGCGCGTGATG
GGCAAGGCGAGCTTCGCGACGGTGCAGGACGGCTCGGGCCAGATCCAGTTCTTCGTGACGCCGAACGACGTCGGCGCGGA
AACCTACGACGCATTCAAGAAGTGGGACCTCGGCGACATCGTCGCCGCCCGCGGCGTGCTGTTCCGCACCAACAAGGGCG
AGCTGTCGGTCCAGTGCAAGGAGTTGCGCCTGCTGTCGAAGGCGCTGCGTCCGCTGCCGGACAAGTTCCACGGCCTCGCT
GACCAGGAAATGCGCTATCGCCAGCGCTACGTCGACCTGATCGTCACGCCGGAAACACGCGACACGTTCCGCGCGCGCAC
CAAGACCATCGCGTCGATCCGCAAGTTCATGGACAACGCCGAGTTCATGGAAGTCGAAACGCCGATGCTGCACCCGATCC
CGGGCGGCGCCGCGGCCAAGCCGTTCGTCACGCATCACAACGCGCTCGACATGCAGATGTTCCTGCGCATCGCGCCGGAG
CTGTACCTGAAGCGCCTGATCGTCGGCGGTTTCGAACGCGTGTTCGAGATCAACCGCAACTTCCGGAATGAAGGCGTGTC
GCCGCGCCACAACCCGGAATTCACGATGATGGAGTTCTACGCCGCGTACACCGATTACCGCTGGCTGATGGATTTCACCG
AACAGCTGATCCGCCAGGCGGCGATCGATGCGCTCGGCACCGCGACGATCCAGTACCAGGGCCGTGAGCTCGATCTCGCG
AAGCCGTTCCACCGCCTGACGATCACGCAGGCGATCCAGAAGTACGCGCCGCAGTACACCGACGGCCAGCTGTCGGACGA
CGCATTCCTGCGCAGCGAACTGAAGCGCCTCGGCGTCGACGTGTCGCAGCCGGCCTTCCTGAACGCCGGCATCGGCGCGC
TGCAACTCGCGCTGTTCGAGGAAACCGCCGAATCGCAGCTGTGGGAGCCGACCTACATCATCGACTACCCGGTGGAAGTG
TCGCCGCTCGCACGCGCATCGGATACGGTGCCGGGCATCACCGAGCGTTTCGAGCTGTTCATGACGGGCCGCGAAATCGC
GAACGGCTTCTCCGAGCTAAACGATCCGGAAGACCAGGCCGCCCGCTTCAAGAAGCAGGTCGAGCAAAAGGACGCCGGCG
ACGAGGAAGCCATGTTCTTCGACGCCGACTATATCCGCGCGCTCGAGCACGGGATGCCGCCGACGGGCGGTTGCGGGATC
GGTATCGACCGTCTCGTGATGCTGCTGACCGACAGCCCGACGATCCGCGACGTGCTGCTGTTCCCGCACCTGCGCCGCGA
AGACTGA

Protein sequence :
MTEPTQTQPAVAADENQIIAERREKLRALREQGIAYPNDFRPTHHAADLQVKFADSDKAALEANPVEVSVAGRMMLKRVM
GKASFATVQDGSGQIQFFVTPNDVGAETYDAFKKWDLGDIVAARGVLFRTNKGELSVQCKELRLLSKALRPLPDKFHGLA
DQEMRYRQRYVDLIVTPETRDTFRARTKTIASIRKFMDNAEFMEVETPMLHPIPGGAAAKPFVTHHNALDMQMFLRIAPE
LYLKRLIVGGFERVFEINRNFRNEGVSPRHNPEFTMMEFYAAYTDYRWLMDFTEQLIRQAAIDALGTATIQYQGRELDLA
KPFHRLTITQAIQKYAPQYTDGQLSDDAFLRSELKRLGVDVSQPAFLNAGIGALQLALFEETAESQLWEPTYIIDYPVEV
SPLARASDTVPGITERFELFMTGREIANGFSELNDPEDQAARFKKQVEQKDAGDEEAMFFDADYIRALEHGMPPTGGCGI
GIDRLVMLLTDSPTIRDVLLFPHLRRED

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed CAD66193.1 putative lysil-tRNA synthetase LysU Not tested PAI III 536 Protein 7e-135 55
lysS YP_005163386.1 lysyl-tRNA synthetase Not tested Not named Protein 6e-86 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
GEM_1310 YP_006615440.1 lysyl-tRNA synthetase VFG1668 Protein 4e-135 55